FMO08258.5prime Sequence
1027 bp (912 high quality bases) assembled on 2010-03-11
> FMO08258.5prime
CAGTCGACATGGACTACCAGTACTTCGAGGAGGAATCGGACTACATTGAT
CTGGACGAGGAGGAGGAGGATGACGACGTGGTGACAGCCGGCAGCTTGGA
CCACAGATTTGGGCAGCCAAACGGCGAGGAGGACTATTATTTCGGCGGGG
ACGATGTGGAGGAGGAGCTGGTGGTAGATGGACACGGTGTCCTGGAGCTG
GCCGGGCGCCTACTCGAGAGCCTGCAGAGCTGCGTGCAGCCATCTGTGCT
GCAGGTCATGCAGTATGTGGCGCCCATGCTGCTCCTCTGCCTCCTGTGCC
GCCTGCTGTGCCTCCTCTACTCGCAGCGCAGACGCCTCACCAGCCTGGCA
CCGCTGCATTTGTTCCACTTCGCCTGCGGCTTGATTATACTGCAGATCAC
GGTGGGCTACCGACTGCTCCTACTTCTCCTGCTGGCCGCCGTGGGCTACC
TGCTGCTCCAGCTATTGCGACTGGGACGAAGAGGAGCTCAAGTTCTGGCC
GTTCTAACCGTGGGCAGCCAGTTCCTGTACGAACTGCTCATTTGGCGGCG
GCGCAGTGACTGGCCACAGCTGCGCGGCATCCAGATGGTGGTCAATATGA
AGCTTATCTCGCTGGGCTTCGACCTGACCGCCAGTGGGCAGCTGCAGGCG
AGGATTCCGGGTCCGTTTGCCTACCTGGGCTACATCTACAGTCCGGCCAC
CTGCGCCTTGGGGCCCTGGGTGAGCTTCGGCTGCTACATGGACTGTCTGG
TGCCACGGAATAGCTGGCTGGTCAGCCTGCGTCGCCTCTTGCCCAACGTG
TGATCTGCGTGCTGGGCGTGACCGTGTCCAATTGCGTGGCTCCGGGCGCT
GAGTGACTTCTTCGGGATAACTCGCACTTCCTGGTCATGTACTGGGACGC
ACTGATGTGCGCAGCACCACTACTTTGTGGGCATGATGGCGCAGGGCTGC
TTGTAGCCTCCGATCACGACTGGACGGGCACAAGAGTCGGACATGCTGTA
TCCTTGATCTCAGCCTGTGAATCAATG
FMO08258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| por-RC | 2257 | CG6205-RC | 102..1114 | 9..1011 | 4695 | 98.3 | Plus |
| por-RB | 1848 | CG6205-RB | 99..1111 | 9..1011 | 4695 | 98.3 | Plus |
| por-RA | 2331 | CG6205-RA | 99..1111 | 9..1011 | 4695 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18378780..18379753 | 977..9 | 4480 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:03 has no hits.
FMO08258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:16 Download gff for
FMO08258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| por-RA | 90..1113 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:07 Download gff for
FMO08258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| por-RA | 90..1113 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:21 Download gff for
FMO08258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| por-RA | 90..1113 | 1..1014 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:21 Download gff for
FMO08258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18378739..18379758 | 1..1014 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:07 Download gff for
FMO08258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18272772..18273791 | 1..1014 | 97 | | Minus |
