FMO08259.5prime Sequence
1069 bp (948 high quality bases) assembled on 2010-03-11
> FMO08259.5prime
CAGTCGACATGACATCAAATAGTTGTTTAATCAGTCTAGGCCTTCTCCTG
GTCCTTATTCAAATTCTAGCTCCAGCAAAGGCTGCGGAGCACTCAGTGTT
CACCCACAAAAACGCATCATCGGTCTTGGGTCAATTGGTTACCTCGAGTA
CCCTAGTATGGGAAAGCTATGACCCCAAGGATGCTACACAGTTGCAGTTC
GCCGTGGAGGGCGGAAAGTACGTTACTGAGGATGAGCATTACCCCATGTA
CGTATGTCGTGTACCAATCGATGGTATCCAAGTGTCCGGCCATACCGAGA
AAATCCTTCAGAGACACGTCTGCCTTGCGGCCCACTATAAGCACGGAAAA
TACGACAACTTCGATGTCCTTATGAACAAGGGTCACCTGGGGAAGGTTGG
CTGGCGTCATTGGCGTAAGTTCGATGCTGGTGTTCCCGTCGGTGCCATAC
GCATTGGAGATGACTCTTACATTGGTCGCCATCGGGCCCCAAGTCAACCG
AACAAGGACGGGGTCGTCACCCATTGGGGAGCAGACTTCAATCTGGGCCA
CTTGGAGCCGGTGGGTCTGGGAAAAATTAGGGTCATCGAAGCCGAACGTG
AGAAGTACTACGACGACGGCGAGGTTTTAGTCGAAACAGAGCCCTTCCGA
TACGAGCTCAGGGACATCAAACTGGATCGATTGCGCACTGATATTCAAGA
GAATATGACTGAACTGGTTACTAGGAAGCTTGAAAATCTGGAAGATAAAT
ATAGTACTGTGGAGACTATTCTAAGCTATACCTTTAACTATAATCAATAT
TGGGGATCCCACGAGGGTGTTGCTCGTGTTTACCAACAAAAATATTTGAA
AAAGATGAGCCGTTCCGGCTGAAATTAATGGGGCCTTAAACACATCGAAA
GCGATCGGAAACAGGCAGTGCCCACGAAACTTTGGCCTGTACAGCATTAT
TGTTACCCTAGTGCAATTTTGTGACCCTGGAGGCGCGTACAGTGCAAGCT
TCTTTGCTCTTTATTACGGAACGATGAAATGTTTCCCGAAGATACAGCCA
AGGTGCAAAACTATCTTGA
FMO08259.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| uzip-RB | 4114 | CG3533-RB | 264..1308 | 9..1040 | 4750 | 97.9 | Plus |
| uzip-RA | 2463 | CG3533-RA | 264..1308 | 9..1040 | 4750 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25027776..25028484 | 9..717 | 3545 | 100 | Plus |
| 2R | 25286936 | 2R | 25028541..25028877 | 717..1040 | 880 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:35 has no hits.
FMO08259.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:18 Download gff for
FMO08259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| uzip-RA | 269..1342 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:50 Download gff for
FMO08259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| uzip-RA | 257..1330 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:00 Download gff for
FMO08259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| uzip-RA | 257..1330 | 1..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:00 Download gff for
FMO08259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25027769..25028484 | 1..717 | 99 | -> | Plus |
| 2R | 25028542..25028895 | 718..1058 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:50 Download gff for
FMO08259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20915292..20916007 | 1..717 | 99 | -> | Plus |
| arm_2R | 20916065..20916418 | 718..1058 | 92 | | Plus |
