FMO08261.5prime Sequence
728 bp (728 high quality bases) assembled on 2010-03-11
> FMO08261.5prime
CAGTCGACATGCATTCCACAATGAGTGTACAACATGGGCTGGTTGCCCTG
GTACTGATCGGCTGTCTGGCACATCCGTGGCACGTCGAGGCCTGCTCCAG
CCGTACGGTGCCCAAGCCGCGCTCTTCGATCTCCTCGTCCATGTCCGGCA
CGGCATTGCCGCCGACCCAGGCTCCAGTCACTAGTAGCACCACAATGCGC
ACCACCACGACGACCACGCCCAGGCCCAATATTACATTCCCCACATACAA
ATGTCCGGAAACCTTCGATGCCTGGTACTGTTTGAACGATGCCCATTGCT
TTGCGGTGAAGATAGCCGATCTACCGGTTTACAGCTGCGAGTGCGCGATT
GGCTTTATGGGACAGCGATGCGAATACAAGGAGATCGACAATACTTACCT
GCCCAAGAGGCCGCGTCCGATGTTGGAGAAGGCGAGCATTGCCAGTGGAG
CCATGTGTGCCCTGGTATTTATGCTGTTTGTCTGCCTGGCCTTCTATTTG
CGCTTCGAGCAGCGGGCTGCCAAGAAGGCCTACGAACTGGAGCAGGAACT
GCAGCAGGAATACGACGATGACGACGGCCAGTGCGAGTGCTGCCGCAACC
GGTGCTGTCCAGATGGCCAGGAGCCAGTCATTCTGGAGCGCAAGCTACCC
TACCACATGCGGCTGGAGCACGCGCTAATGTCCTTCGCCATTCGACGCAG
CAACAAGCTGGCAAGCTTTCTAGACCAT
FMO08261.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-RF | 1457 | CG10334-RF | 360..1061 | 9..710 | 3510 | 100 | Plus |
| spi-RG | 1576 | CG10334-RG | 479..1180 | 9..710 | 3510 | 100 | Plus |
| spi-RA | 1653 | CG10334-RA | 556..1257 | 9..710 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19568296..19568997 | 710..9 | 3510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 760..835 | 609..532 | 124 | 65.8 | Minus |
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 820..859 | 571..532 | 119 | 77.5 | Minus |
FMO08261.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:11 Download gff for
FMO08261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 562..1271 | 3..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:01 Download gff for
FMO08261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 553..1262 | 3..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:01 Download gff for
FMO08261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 553..1262 | 3..716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:01 Download gff for
FMO08261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19568291..19569000 | 3..716 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:01 Download gff for
FMO08261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19568291..19569000 | 3..716 | 99 | | Minus |
