FMO08271.5prime Sequence
1030 bp (897 high quality bases) assembled on 2010-03-11
> FMO08271.5prime
CAGTCGACATGTGCACCGCTGGCGTGGTTGATGGTGGTGCTGGGGCCACT
ACAGGTGGTGCTGATGCGGCTGATAATAGTGGAGCTGCGCCCGCCCCAAG
TTCGACGGCCTTGAACCCCCCACAGGTCTCCATTTCCATGAACGAACCGG
AAAACCTGAAACCACCTGCCAAATCCAACTTCCGCCGTTATCTTCAGTGG
ATCCTAGCACCTGTCCTGACCGCCATTTCCGGTCTGATCCTCTACTACCA
AGGGCCTTGGTATGGAGTGGCCACGCTATATGCCGCATTGATATCCATAC
TGCTGGTGCGTCCAGGATGGCGCTGGTTCTACATTGCAGCTGTTACCACA
CCCAGGGATACTGTAGCCCTCTTTGCCTACATCCGTGTGCTGCTCTTCAT
TAAGCGCCAGGAGCGCAAGAACCTGAACATCGGAGACATCTTTGAGTCAA
ATGTGGCCCGGCAGCCGGATAAACTGGCCATTGTCAGTGAGTCCCAGCAG
TGGACCTTCCGCCAGGTGAACGAGCATTCGAACCGGGTGGCCAACGTGTT
CCACAGTCACGGCTACAAAAAGGGCGACGTGGTGGGTCTGCTGCTCGAGA
ATCGCGCCGAATTTGTAGCCACCTGGCTTGGTCTCTCCAAGATCGGCGTG
ATCACGCCGCTGATTAACACAAACCTCCGTGGAGCCTCACTGCAGCACAG
CATTACCGTGGGCCAGTGCACGGCGCTCATTTACGGCGCCAGTTTCCGGT
CGGCCGTGATGGATATCGCCAAGGATCTGCCCGCCCACGTCGGACTGTAT
CAGTTCAACGACGAGTCCAACAGGAGTGGTGGCTTCCGAGGGCCTTAGCC
AGGACTGGCCCAGCATTGAACGGCCTTCTGGAGACGGCGGCAAGGATAGT
GCCGCGGCGCTTCTCGGCGATCATCACGACAGTGGTCTACTCTACACGTC
GGAACACGGCTTGCCAGCAGCCGTCATCTACGCGATTCTCGTAACTTTTC
TAGCTGTCGGATCATAACGCTTGATTCAGG
FMO08271.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44252-RD | 2651 | CG44252-RD | 215..1223 | 9..999 | 4490 | 97.5 | Plus |
CG44252-RE | 2745 | CG44252-RE | 309..1317 | 9..999 | 4490 | 97.5 | Plus |
CG44252-RB | 2538 | CG44252-RB | 217..1110 | 124..999 | 3915 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23059352..23059882 | 365..891 | 2455 | 99.2 | Plus |
2R | 25286936 | 2R | 23059053..23059293 | 124..364 | 1205 | 100 | Plus |
2L | 23513712 | 2L | 10513191..10513446 | 738..483 | 620 | 82.8 | Minus |
2R | 25286936 | 2R | 23057517..23057635 | 9..127 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:26:34 has no hits.
FMO08271.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:30 Download gff for
FMO08271.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30194-RD | 185..1201 | 1..999 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:42 Download gff for
FMO08271.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44252-RE | 301..1317 | 1..999 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:08 Download gff for
FMO08271.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44252-RE | 301..1317 | 1..999 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:08 Download gff for
FMO08271.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23057509..23057633 | 1..125 | 97 | -> | Plus |
2R | 23059055..23059293 | 126..364 | 100 | -> | Plus |
2R | 23059352..23060005 | 365..999 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:42 Download gff for
FMO08271.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18945032..18945156 | 1..125 | 97 | -> | Plus |
arm_2R | 18946578..18946816 | 126..364 | 100 | -> | Plus |
arm_2R | 18946875..18947528 | 365..999 | 96 | | Plus |