FMO08286.5prime Sequence
1061 bp (975 high quality bases) assembled on 2010-03-11
> FMO08286.5prime
CAGTCGACATGAGTATGTCGCGCGGCGGCAACACAACTCTGGACTTGCAG
CCGCTCCTGGCGGAGAGCGATGTCGGAAACAGGGAGCTGGAGGAGAAGAT
GGGCGGATCGGCGGATCGGTCATCGCTGCTCGATGGATCCGGTTCGAAGG
AGCTGAGTCACCGGGAACGCGAGGACTCGGCGTTGTTCGTCAAGAAGATC
GGGAGCGCCTTGTTCTATGGCTTGTCCTCCTTCATGATTACGGTGGTAAA
CAAGACGGTGCTTACCTCCTACCACTTCCCCTCGTTCCTGTTCCTCAGCC
TCGGGCAACTTACTGCTAGCATTGTGGTCCTGGGCATGGGCAAGCGCCTG
AAATTGGTGAACTTTCCCCCTCTGCAGAGGAATACCTTCGCCAAGATCTT
TCCGCTGCCACTGATATTTCTGGGAAACATGATGTTTGGACTGGGTGGCA
CAAAAACCTTGAGTCTGCCCATGTTCGCAGCCCTACGACGCTTCTCTATC
CTGATGACCATGCTGCTGGAGCTCAAGATCCTGGGACTGCGACCTTCGAA
TGCGGTTCAGGTCAGCGTATACGCAATGATCGGTGGAGCGCTGCTGGCCG
CCTCTGATGATCTGTCCTTCAACATGAGGGGCTACATCTATGTGATGATC
ACTAACGCCTTGACCGCCTCGAATGGCGTATATGTGAAGAAAAAACTCGA
CACCTCGGAGATCGGAAAGTACGGGCCTAATGTACTACAACTCGCTGTTT
ATGTTTCTGCCTGCCCTGCCCTCAACTATGTTACAGGGAATCTAGATCAG
GCGCTGACTTTGAACAATGAATGACTCAGTGTTTGTGGTGCAGTTCCTGC
TCAGTTGCGTTATGGGTTTCATCCTATCGTACAGCACCATCCTGTGCACG
CAATTCAACTCGGCGCTGACCACCACCATTGTGGGATGCTGAAAACATCT
GCGTAACATATCTGGGCATGTCATTGAGGACTACGTCTTCTCTGGACAAC
TGTATGGGATCACATCAGCGTGCTGGCTAGTCCTGCTCTAACGTACGTAC
TTCGGCGAGCG
FMO08286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32174-RC | 3871 | CG32174-RC | 216..1267 | 9..1048 | 4865 | 98.4 | Plus |
| frc-RB | 3871 | CG3874-RB | 216..1267 | 9..1048 | 4865 | 98.4 | Plus |
| frc-RA | 1609 | CG3874-RA | 216..1267 | 9..1048 | 4865 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17432009..17432975 | 971..9 | 4545 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:02 has no hits.
FMO08286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:16 Download gff for
FMO08286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32174-RC | 211..1274 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:34 Download gff for
FMO08286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1279 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:51 Download gff for
FMO08286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1279 | 9..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:51 Download gff for
FMO08286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17431912..17432975 | 9..1057 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:34 Download gff for
FMO08286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17425012..17426075 | 9..1057 | 98 | | Minus |
