Clone FMO08289 Report

Search the DGRC for FMO08289

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:82
Well:89
Vector:pMK33-CFH-BD
Associated Gene/Transcriptrev7-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08289.5prime Sequence

620 bp (620 high quality bases) assembled on 2010-03-11

> FMO08289.5prime
CAGTCGACATGCAGGCGGAGATTAAGGCCGACATCATCGTGGAGGCGATG
GAGGTGCTAGTGAATCACATTCTATACGTGCGCGGTATATACCCCTCGCA
CATTTTTAAAATGAAGCGGATGTACAACTCGCCCATCTATGTGTCCATAT
TTCCACCGCTTAATAACTACCTGGCCGGCGTCCTAAAATCCGCACAAGAA
CTTCTTCGCCGCCGGGAGCTGCAGTGCCTGGAGCTAATAGTGTATCAGAA
GGAGAATGAGAAGTTGGAGAGCTATAAAATGCAACTAGAAACCCAGAGGA
GTGGCCTACCGGCAGAGGATCATTTGATGGAGTTCGAGCAGAACATGCGC
TCTGTCATCTACAAAATCTCTCAGCGCTTAAACCAGGCGCCTAAACTGCC
CGCCGGAAGTTGTCAGTTTAAGGTGCATCTGCACACTACCCAGGAGGCAT
TCATCCGCTTCAGCCATGACTCCCAGTACCAGGAGTTTCCCTGGCTTCAG
ACCCAAAAAACTGAATCCCAAGCGACAGGGCGAACCGTTTACCTCCTTCC
TTTGGCTAGGGTAGATGATTTGGGACTGAAAATGGATGTCCTCATCGTTA
ATGCAAGCTTTCTAGACCAT

FMO08289.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:25
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-RA 831 CG2948-RA 67..664 5..602 2975 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5588939..5589536 5..602 2975 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 19:34:24 has no hits.

FMO08289.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:37 Download gff for FMO08289.5prime
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 1..597 9..606 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:19 Download gff for FMO08289.5prime
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 63..671 1..610 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:07 Download gff for FMO08289.5prime
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 63..671 1..610 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:07 Download gff for FMO08289.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5588935..5589543 1..610 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:19 Download gff for FMO08289.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1414657..1415265 1..610 98   Plus