FMO08292.5prime Sequence
908 bp (908 high quality bases) assembled on 2010-03-11
> FMO08292.5prime
CAGTCGACATGTCCACGCCCACTTCCCCGAAGACGCCCACACCGCCCACT
TTGCCACCGGGCGTGACCAAAACATGTCACATTGTGAAAAGGCCCGATTT
CGATGGCTATGGTTTCAATTTGCATTCGGAGAAGGTGAAACCAGGACAGT
TTATTGGCAAAGTAGATGCGGATTCTCCGGCAGAGGCAGCCGGCCTGAAG
GAGGGCGATCGCATCCTGGAGGTCAACGGGGTGTCCATTGGCAGCGAGAC
CCACAAGCAGGTGGTTGCCAGGATCAAGGCCATTGCGAATGAAGTCCGCT
TGCTGCTCATCGATGTGGATGGCAAGGCCTTGGAGGTGAAACCGGCATCT
CCGCCAGCCGCTGCGTGCAATGGAAACGGTAGTGCCAGTCAGAATGGATA
CGAGGGCACCAAACAGGAGATGCCCGGAGCAAGTGCCAATATCAGTAGCA
TCAGTATGGTGAGCACCAAGCGATCCTCAAATGCCAGCAGCATTCAGAGC
GGCAGTACCATGAATGCCTCCGATTTGGATGTGGTCGATAGGGGAATACC
GGCAGTCGCTGCTCCGGTGGCTATCACCCCGCCTCCCGTTCAAAATGGAA
GTAAACCCTCATCGCCGATTAATAATAACACTTTGATGAGCACACCGCCA
CCGCCGTCCGCTACTAAGGCTGGCATCAACAACAATGGCAGTGTTTATAA
CACCAATGGAAATGGTACAAATGGCATGACCACACCCACTACACCACCCC
CACCGACCAGTGGCTATAAGGCGGGCACCTTGCATTTACCAATGACGGCC
GCCGAAATGCGCGCCAAATTGGCATCCAAGAAGAGTACGATCCCAAGAAC
GAGAGTGTGACCTCAGAGAGTTCGACATCATTCAGAGCTCGCAAGCTTTC
TAGATCAT
FMO08292.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sip1-RA | 1717 | CG10939-RA | 436..1325 | 2..886 | 4295 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17403890..17404748 | 2..859 | 4215 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:42 has no hits.
FMO08292.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:22 Download gff for
FMO08292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 432..1327 | 1..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:07 Download gff for
FMO08292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 435..1330 | 1..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:06 Download gff for
FMO08292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 435..1330 | 1..890 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:06 Download gff for
FMO08292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17403889..17404784 | 1..890 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:07 Download gff for
FMO08292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13291394..13292289 | 1..890 | 98 | | Plus |
