FMO08294.5prime Sequence
473 bp (473 high quality bases) assembled on 2010-03-11
> FMO08294.5prime
CAGTCGACATGTGGAGGAAAGCGAGCAGGTTGGTCAGGGAAACCACCTCG
TGGAAAACGCGTCGTCAGGGACAAGCGGAAGCCCCATCAGCAGCAGTAGC
AACAATAAAACCATCGACAAGGACGAGCACGCCGATTGCCCACGGATTAC
CCATCATCATCACATGGTCGCAGCTCGCTATTGTTGCTGCTGTTGCAGTG
CTCCTGCAATGCCACGTCTGTCAAGCAGCCGGACGAGCTCCACCGGAACC
CTACTACGGTCGCTATATTGGAGATTTTACCAACTTTGCCCATGGCATTA
AGGGTCAAATCTACGCGGTGGACGAGTCGACGCTGTTCGTCAAATCCTTT
GCCTACGACGGCACCGGACCGGACGCCTTCTTCTGGGTGGGCAAGACGCC
AAGGCCCAGTCCCGATGGCTACATCATTCCCTATCCGGAGGAGTACACGG
GCATGGCAAGCTTTCTAGACCAT
FMO08294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34355-RF | 6414 | CG34355-RF | 1118..1565 | 9..456 | 2240 | 100 | Plus |
CG34355-RB | 6235 | CG34355-RB | 939..1386 | 9..456 | 2240 | 100 | Plus |
CG34355-RE | 6256 | CG34355-RE | 939..1386 | 9..456 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23821530..23821746 | 9..225 | 1085 | 100 | Plus |
3R | 32079331 | 3R | 23830176..23830330 | 301..455 | 775 | 100 | Plus |
3R | 32079331 | 3R | 23829955..23830034 | 224..303 | 400 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:15:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2496..2530 | 85..119 | 112 | 80 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2440..2493 | 74..130 | 107 | 68.4 | Plus |
FMO08294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:33 Download gff for
FMO08294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34355-RB | 1..448 | 9..456 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:49 Download gff for
FMO08294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34355-RE | 930..1386 | 1..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:17 Download gff for
FMO08294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34355-RE | 930..1386 | 1..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:17 Download gff for
FMO08294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23821521..23821746 | 1..225 | 98 | -> | Plus |
3R | 23829957..23830033 | 226..302 | 100 | -> | Plus |
3R | 23830178..23830330 | 303..455 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:49 Download gff for
FMO08294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19647243..19647468 | 1..225 | 98 | -> | Plus |
arm_3R | 19655679..19655755 | 226..302 | 100 | -> | Plus |
arm_3R | 19655900..19656052 | 303..455 | 100 | | Plus |