FMO08301.5prime Sequence
548 bp (548 high quality bases) assembled on 2010-06-02
> FMO08301.5prime
CAGTCGACATGATGTCGAAAGATTTTGATTTTTCTCAGAAGGGTATGAGC
GACGCCACTAGTAGCGACTTACGTAACGAGTCAGCACATCCAACATTCTC
TGGGACTAAGCAACTTTTCACGTTAAGCTCGCCGTTTTACCAGGGACCCA
CGTCCTTTGGCGGTAGTGCGGCTATTACTCGCGTTTGGAACAATTTTAAG
TGCAGCAGAATACTTGCTTCTGAAATCAACAAAAAGATGGAACCGCCAAC
TTATTCGGAGTCCTTAGAGTCGAAGATCATGAAACGCCGTCGTCTGTACG
CTCTTTTAAATAGGAAAGAAATTACGTATAGCAAATACCGGAATATACAG
AATGAGTCCCGGATAGGAATCATTAAAGAGGTGGAGGAAACACAAATGCC
AGAAACCACATATAAGAAGAAATCGCCTACGAAACCAGTTATGCGAACAT
TCTACTTCTCGGAGCCTATACCGCTAATGCAACATAATTCAAAGCGCAAT
TTTGTATTTTCCGACCCAATTCCTCTGGATGCAAGCTTTCTAGACCAT
FMO08301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30447-RC | 805 | CG30447-RC | 57..579 | 8..530 | 2615 | 100 | Plus |
| CG30447-RB | 808 | CG30447-RB | 60..582 | 8..530 | 2615 | 100 | Plus |
| CG30447-RA | 785 | CG30447-RA | 37..559 | 8..530 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19947332..19947854 | 8..530 | 2615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:57:22 has no hits.
FMO08301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:50 Download gff for
FMO08301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RB | 31..557 | 1..530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:39 Download gff for
FMO08301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RA | 35..561 | 1..530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:47 Download gff for
FMO08301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RA | 33..559 | 1..530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:47 Download gff for
FMO08301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19947328..19947854 | 1..530 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:39 Download gff for
FMO08301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15834833..15835359 | 1..530 | 99 | | Plus |
