Clone FMO08306 Report

Search the DGRC for FMO08306

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15649-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08306.5prime Sequence

383 bp (383 high quality bases) assembled on 2010-06-02

> FMO08306.5prime
CAGTCGACATGTTACACCTGAGATTTGTCTTTATGGCCGCTTTACCGCTG
CTGCTGTTGCTTCTACTTCAGTTTAGTCCACCTGCAGATGGCTTTATCAT
TCGACTGATTACGGAGACACTGCAGAATAACGTGGCTGGTGAGCCGGTTC
TTCACGAGCGGACTTCTTGGGACTTTGATCCGGAGGCGGCCAAGAGGGCC
AGATCGCTGTACTACGAGAAGAACGGATTCCGCTCGTCCAAATTCATCGA
GCGACTGGGCGTTGGTCTGGATGGGCGGCACGAGGAGCGGCGGGCGGAGC
AAGGACATCGCGATGTGGGACGACTGAATGGGGAACACAATGTGAACTAT
CCGCCTCCACCGGCTGCAAGCTTTCTAGACCAT

FMO08306.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15649-RB 766 CG15649-RB 78..434 9..365 1785 100 Plus
CG15649-RA 462 CG15649-RA 78..434 9..365 1785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20973458..20973634 218..42 885 100 Minus
2R 25286936 2R 20973248..20973396 365..217 745 100 Minus
Blast to na_te.dros performed on 2014-11-28 21:56:08 has no hits.

FMO08306.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:48 Download gff for FMO08306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 46..413 1..371 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:13 Download gff for FMO08306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 71..438 1..371 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:12 Download gff for FMO08306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 71..438 1..371 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:12 Download gff for FMO08306.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20973244..20973394 219..371 98 <- Minus
2R 20973458..20973634 42..218 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:13 Download gff for FMO08306.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16860749..16860899 219..371 98 <- Minus
arm_2R 16860963..16861139 42..218 100 <- Minus