FMO08310.5prime Sequence
584 bp (584 high quality bases) assembled on 2010-06-02
> FMO08310.5prime
CAGTCGACATGGATTTGTTTAGCTCTCTGCTGCTGTGCCTGGGAATTATT
TCATTACCCAATGTGTTTACGATTTGCATTCCGCCCAATCACTGCATTGA
AGATATGGAGGAAAGCGATGCGAAAGAGCGATTCGACTATGTACTTGGCA
AATATGAGGAGGTGGAAATGAATATTCCCGGAAAACCAGTTGGTTTGTAT
GGGAAAGTGGTTACGCATGGCGAGGCGGAGGAGCAGCACTTGGTGTTCCA
GTACATGGACAATACGCTGCATGACATCATCCAGACGTGTGCGTTTGTGG
TCAAGCGGAATCCCGGTGAGTGCGAGAACATCCGCACCTACTGCTCGGCC
TTTCTGAGCCGCCTGCCACGCCCCCTGCTGGAGCGCAAGCCCATCAACGT
GTGTGACGATGGGACGCGAGTGGCGGAGGACGAGCCGGAAACGGAAGCGG
AAGACAATCCGGATGCTGATGCTGAGGGGGAGACTGATCCGCAGCAGGAG
CAGGGAGTTGGTCAAGCGGAGACCACAACAGCGGAGCCGGCTAGCTCCAA
ATTAAGTGAATTTTATGCAAGCTTTCTAGACCAT
FMO08310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-RB | 663 | CG14854-RB | 7..565 | 8..566 | 2780 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14559264..14559637 | 566..193 | 1855 | 99.7 | Minus |
| 3R | 32079331 | 3R | 14559702..14559790 | 193..105 | 445 | 100 | Minus |
| 3R | 32079331 | 3R | 14559991..14560048 | 65..8 | 290 | 100 | Minus |
| 3R | 32079331 | 3R | 14559896..14559935 | 104..65 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:24 has no hits.
FMO08310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:52 Download gff for
FMO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:20 Download gff for
FMO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:22 Download gff for
FMO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:22 Download gff for
FMO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14559264..14559636 | 194..566 | 99 | <- | Minus |
| 3R | 14559702..14559790 | 105..193 | 100 | <- | Minus |
| 3R | 14559896..14559934 | 66..104 | 100 | <- | Minus |
| 3R | 14559991..14560051 | 1..65 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:20 Download gff for
FMO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10384986..10385358 | 194..566 | 99 | <- | Minus |
| arm_3R | 10385424..10385512 | 105..193 | 100 | <- | Minus |
| arm_3R | 10385618..10385656 | 66..104 | 100 | <- | Minus |
| arm_3R | 10385713..10385773 | 1..65 | 93 | | Minus |
