FMO08319.5prime Sequence
773 bp (773 high quality bases) assembled on 2010-06-02
> FMO08319.5prime
CAGTCGACATGGATCGTTGGCAGAATCGCGTGGCCGTTATCAGTGGCGCC
AGTTCCGGAATCGGAGCAGCCTGTGCCCGGCTTTTGGTGGCAGCCGGTCT
ACAGGTGGTTGGCCTGGCCCGACGCACCGATCGCCTCGAGCAGCTGCGCC
AATCTTTGCCGGCGGAGCAGAGGATGCGCTTCCATCAGCACAAATGCGAT
GTATCGCAGGAGTTGCAGGTGGACACGGCCTTCGAGTGGATTGAAAAGGA
ACTGGGCGGCATCGATGTGCTGATCAATAATGCGGGCATTGTGCTCGGTG
GCCAGCTGATCGATATGCCCACCAAGGACATCAACAACATACTACAGACG
AATCTCATGGGCAGCATTTACTGCACCAAATTGGCCGCCAGCAGCATGAG
ACGCCGCCAGGTGGCTGGACATCTGATCTTTGTGAATAGCACGGCCGGAG
TGGCCGGTTATAAGCCGGATCCGGCGGATGAGAGCCTCAACGCGTACACG
CCCAGCAAATTTGCCCTGACTGCCGTCCAGGAGATCTGCCGACAGGAGCT
AATCAATCAAGGATCAAAAATTAAGACCACGAGCATCAATCCCGGCTGGG
TGGCCACCGAGATCGTTCCGGACGAAACGAAGGCCAAGCTGGGCGAGGTA
ATCCTCCAGGCGGACGACGTCGCTCAGGCTGTACTGTACGCCCTATCCAC
GCCACCGCACACTCAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAAT
ACTTCGCAAGCTTTCTAGACCAT
FMO08319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-RB | 1074 | CG10962-RB | 29..775 | 9..755 | 3600 | 98.8 | Plus |
| CG9360-RA | 1035 | CG9360-RA | 110..175 | 9..74 | 210 | 87.9 | Plus |
| antdh-RA | 950 | CG1386-RA | 29..168 | 8..147 | 205 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8973655..8974227 | 581..9 | 2745 | 98.6 | Minus |
| X | 23542271 | X | 8973207..8973381 | 755..581 | 860 | 99.4 | Minus |
| X | 23542271 | X | 11764416..11764481 | 74..9 | 210 | 87.9 | Minus |
| X | 23542271 | X | 11168891..11169030 | 147..8 | 205 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:59:07 has no hits.
FMO08319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:19 Download gff for
FMO08319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 9..770 | 1..761 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:57 Download gff for
FMO08319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 21..782 | 1..761 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:51 Download gff for
FMO08319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 21..782 | 1..761 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:51 Download gff for
FMO08319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8973200..8973380 | 582..761 | 97 | <- | Minus |
| X | 8973655..8974231 | 1..581 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:57 Download gff for
FMO08319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8867233..8867413 | 582..761 | 97 | <- | Minus |
| arm_X | 8867688..8868264 | 1..581 | 97 | | Minus |
