Clone FMO08323 Report

Search the DGRC for FMO08323

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:23
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10635-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08323.5prime Sequence

440 bp (-86 high quality bases) assembled on 2010-06-02

> FMO08323.5prime
CAATCCACATGGCAGCAAAAGTATCGAGCGGCACGAACAAAGTGTTCCAG
AACCACGATGACGTGCACATCTCCTTCGAGGATCAGCGGCGGATCAACCG
CTTTGCGAAGCACAACGCCCGCATGGATGACTTCAAAGCGGAGCTGGAAA
CGAAGCGCAATGAGCTGAAGAGCTTGGAGGAGGCGCTGGAGGAGATTGAG
CTGTTCGACGAGGACGAGGACATACCGTTCCTGGTTGGCGAGGTGTTCCT
CTCGCACAAGCTGGAGAAAACACAAGACATGCTGAAGGAGACCAAGGAGC
AGGTGCTCAAGGAGATCGCCGGCGTGGAAGCCAAGGAGAAGGTTATCAAG
GCGGAAATGGACGAGCTGAAGGCTCATCTGTATCAGCGATTCGGCAGCAA
TATCTCACTAGAGGCCGAGGATGCAAGCTTTCTAGACCAT

FMO08323.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10635-RA 543 CG10635-RA 65..478 9..422 1950 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5367406..5367774 422..54 1740 98.1 Minus
3L 28110227 3L 5367900..5367944 53..9 210 97.8 Minus
Blast to na_te.dros performed on 2014-11-28 19:05:50 has no hits.

FMO08323.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:27 Download gff for FMO08323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10635-RA 62..481 2..426 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:17 Download gff for FMO08323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10635-RA 62..481 2..426 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:33 Download gff for FMO08323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10635-RA 62..481 2..426 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:33 Download gff for FMO08323.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 5367403..5367774 54..426 97 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:17 Download gff for FMO08323.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5360503..5360874 54..426 97 <- Minus