FMO08323.5prime Sequence
440 bp (-86 high quality bases) assembled on 2010-06-02
> FMO08323.5prime
CAATCCACATGGCAGCAAAAGTATCGAGCGGCACGAACAAAGTGTTCCAG
AACCACGATGACGTGCACATCTCCTTCGAGGATCAGCGGCGGATCAACCG
CTTTGCGAAGCACAACGCCCGCATGGATGACTTCAAAGCGGAGCTGGAAA
CGAAGCGCAATGAGCTGAAGAGCTTGGAGGAGGCGCTGGAGGAGATTGAG
CTGTTCGACGAGGACGAGGACATACCGTTCCTGGTTGGCGAGGTGTTCCT
CTCGCACAAGCTGGAGAAAACACAAGACATGCTGAAGGAGACCAAGGAGC
AGGTGCTCAAGGAGATCGCCGGCGTGGAAGCCAAGGAGAAGGTTATCAAG
GCGGAAATGGACGAGCTGAAGGCTCATCTGTATCAGCGATTCGGCAGCAA
TATCTCACTAGAGGCCGAGGATGCAAGCTTTCTAGACCAT
FMO08323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10635-RA | 543 | CG10635-RA | 65..478 | 9..422 | 1950 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5367406..5367774 | 422..54 | 1740 | 98.1 | Minus |
3L | 28110227 | 3L | 5367900..5367944 | 53..9 | 210 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:05:50 has no hits.
FMO08323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:27 Download gff for
FMO08323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10635-RA | 62..481 | 2..426 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:17 Download gff for
FMO08323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10635-RA | 62..481 | 2..426 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:33 Download gff for
FMO08323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10635-RA | 62..481 | 2..426 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:33 Download gff for
FMO08323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5367403..5367774 | 54..426 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:17 Download gff for
FMO08323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5360503..5360874 | 54..426 | 97 | <- | Minus |