FMO08327.5prime Sequence
332 bp (332 high quality bases) assembled on 2010-06-02
> FMO08327.5prime
CAGTCGACATGTGCCAAACAATGCGTTGCATCCTGGTTGCCTGTGTGGCC
CTTGCCCTCCTAGCCGCCGGCTGCCGAGTGGAGGCGTCCAACTCCAGACC
TCCGCGAAAGAACGATGTCAACACTATGGCTGATGCCTACAAGTTCCTGC
AGGATCTGGACACCTACTACGGCGACAGAGCCCGCGTTCGGTTCGGAAAG
CGCGGATCGCTGATGGATATCCTGAGGAATCACGAGATGGACAACATAAA
TCTAGGAAAAAATGCCAACAATGGAGGAGAATTTGCTCGCGGTTTTAATG
AGGAGGAGATATTCGCAAGCTTTCTAGACCAT
FMO08327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NPF-RC | 579 | CG10342-RC | 86..391 | 9..314 | 1530 | 100 | Plus |
| NPF-RB | 518 | CG10342-RB | 25..330 | 9..314 | 1530 | 100 | Plus |
| NPF-RA | 569 | CG10342-RA | 76..381 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16610779..16611055 | 9..285 | 1385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:19:20 has no hits.
FMO08327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:13 Download gff for
FMO08327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| npf-RA | 68..383 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:31 Download gff for
FMO08327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| npf-RA | 69..384 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:01 Download gff for
FMO08327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NPF-RA | 69..384 | 1..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:01 Download gff for
FMO08327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16610779..16611054 | 9..284 | 100 | -> | Plus |
| 3R | 16611108..16611140 | 285..318 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:31 Download gff for
FMO08327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12436501..12436776 | 9..284 | 100 | -> | Plus |
| arm_3R | 12436830..12436862 | 285..318 | 94 | | Plus |
