FMO08334.5prime Sequence
278 bp (278 high quality bases) assembled on 2010-06-02
> FMO08334.5prime
CAGTCGACATGCTGAATTCCCTGGACAACCTGGAGGATTGCGAGGAGATC
TACACTCGCGAGATGCACGATATGAACATTGGCGTTGGAGAAGGAACCGT
TCCATGCTGGGTGTACCTGCTGCAGAAGTACCCGGAGAACCTACTTAGTC
TGCGCTACTTGTCCAGCTACGAGAACTCAACCACCCATCCATACATTATG
CGCCATCGCCGCACCCACAAGCATCCGGCCCAGGACGACCTCACCTACGA
GGCCCAGAACGCAAGCTTTCTAGACCAT
FMO08334.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tina-1-RB | 1429 | CG2803-RB | 914..1165 | 9..260 | 1260 | 100 | Plus |
| Tina-1-RA | 914 | CG2803-RA | 399..650 | 9..260 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24940889..24941055 | 260..94 | 835 | 100 | Minus |
| 2R | 25286936 | 2R | 24941122..24941207 | 94..9 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:21:39 has no hits.
FMO08334.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:18 Download gff for
FMO08334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RB | 896..1157 | 1..264 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:27 Download gff for
FMO08334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 392..653 | 1..264 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:08 Download gff for
FMO08334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 392..653 | 1..264 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:08 Download gff for
FMO08334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24940886..24941054 | 95..264 | 98 | <- | Minus |
| 2R | 24941122..24941212 | 1..94 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:27 Download gff for
FMO08334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20828409..20828577 | 95..264 | 98 | <- | Minus |
| arm_2R | 20828645..20828735 | 1..94 | 96 | | Minus |
