FMO08338.5prime Sequence
665 bp (665 high quality bases) assembled on 2010-06-02
> FMO08338.5prime
CAGTCGACATGCATCATCACCAGAATCTCGGAGACGCGGCCGCCATGAAT
GGAATGATCCCGCCATACGAAGCCATGGCTATGTACGAGCAGCCCAAGCC
CAGATTCATCTTCAAGATGCCCCGCGTGGTGCCTGACCAGAGGTCCAAGT
TCGATAGCGACGAGCTCTTCCGCCGATTGAGTAGGGAGAGCGAGGTTCGC
TACACAGGATACCGGGAACGTGCAATGGAGGAGCGCAGGATGCGGTTTGT
CAACGACTGCCGCAAGGGCTATGCGGAGATATCGATGGTAGCTTCAGGAA
CTAATCTGCAGCTCTACTTCAACGCCAACCACAATCCGTACGCCCAGGAG
CAGGATTGCGATTTCGAGCGGGAGCGGGGCAAAGTTCATTTGCGTTCTAG
TTTCATCATGAACGGGGTGTGCGTCCGCTTCCGGGGCTGGGTGGATCTGG
ACCGACTGGATGGCGCTGCCTGCCTGGAGTTCGATGAACAACGAGCCCAG
CAGGAGGATGCTCAGCTGCAGGAGCAGATTCAAAGCTACAACCAGCGCAT
GGCTGAGTCCAGGAGAATCTACCACACGCCCCAGACTCCACCCGAGGATC
ACCATCACAGAGGTGGGCCTGGTCTGCCTAGAGGACCAATGGGATGGGCA
AGCTTTCTAGACCAT
FMO08338.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 744 | CG7960-RA | 34..675 | 6..647 | 3210 | 100 | Plus |
| Bgb-RB | 1242 | CG7959-RB | 337..802 | 82..547 | 470 | 75 | Plus |
| Bgb-RA | 1242 | CG7959-RA | 337..802 | 82..547 | 470 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1647902..1648543 | 6..647 | 3210 | 100 | Plus |
| 3L | 28110227 | 3L | 1640047..1640512 | 82..547 | 425 | 72.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:10 has no hits.
FMO08338.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:56 Download gff for
FMO08338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:54 Download gff for
FMO08338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:22 Download gff for
FMO08338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 29..675 | 1..647 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:22 Download gff for
FMO08338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1647897..1648543 | 1..647 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:54 Download gff for
FMO08338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1647897..1648543 | 1..647 | 99 | | Plus |
