FMO08341.5prime Sequence
674 bp (674 high quality bases) assembled on 2010-06-02
> FMO08341.5prime
CAGTCGACATGGAGAGCCTGTACCACCAAACCAACAATGTGGTAAAGGAC
ATCGAGCGCGATTTCCAGCGACTGAGTCAGCTCAGTGCCCAGGAATCGCT
TGACGTGGAAAACGGCATTCAATTGAAGATTACCCAGGCGAACGCCAACT
GCGATCGGTTGGATGTGCTGCTGTATAAGGTGCCACCTTCGCAGCGACAA
AGCTCCAAACTTCGTGTGGATCAGCTGAAATATGACCTGAGACACCTGCA
GACATCACTGCAGACGGCGCGGGAACGAAGACAGCGACGAATGCAGGAGA
TCTCCGAGAGGGAACAGCTGCTGAATCACAGATTCACGGCAAACAGCGCG
CAGCCGGAGGAAACGCGCCTGCAATTGGACTACGAACTGCAGCATCATAC
GCAGCTGGGTAACGCCCATCGGGGTGTGGATGACATGATTGCCTCGGGCA
GCGGCATTCTCGAGAGCCTGATCTCGCAGAGAATGACGCTGGGCGGAGCG
CACAAGAGAATCCAGGCGATAGGCAGCACACTGGGTCTGTCCAATCACAC
GATGAAACTTATTGAACGCCGGCTGGTCGAAGATCGTCGGATATTCATCG
GAGGAGTGGTGGTCACCTTGCTTATCATCGCCCTGATCATCTATTTCCTA
GTGCTCGCAAGCTTTCTAGACCAT
FMO08341.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Membrin-RA | 858 | CG4780-RA | 141..792 | 5..656 | 3170 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5366806..5367315 | 147..656 | 2490 | 99.2 | Plus |
| 3L | 28110227 | 3L | 5366595..5366735 | 5..145 | 690 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:52:58 has no hits.
FMO08341.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:53 Download gff for
FMO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4780-RA | 108..768 | 1..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:24 Download gff for
FMO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| membrin-RA | 138..798 | 1..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:42 Download gff for
FMO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Membrin-RA | 138..798 | 1..663 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:42 Download gff for
FMO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5366592..5366735 | 1..145 | 97 | -> | Plus |
| 3L | 5366805..5367321 | 146..663 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:24 Download gff for
FMO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5359692..5359835 | 1..145 | 97 | -> | Plus |
| arm_3L | 5359905..5360421 | 146..663 | 98 | | Plus |
