FMO08343.5prime Sequence
296 bp (296 high quality bases) assembled on 2010-06-02
> FMO08343.5prime
CAGTCGACATGGTTCTCAGCTCTGAGCTGCTCCAGGATGCCCTGCGGTCC
AGCAACAAGCTTCTATTCGAATGCTATGGCAGCCTGATCAGATGCTATCA
GGAGTGCGTTGAACTTCGCAAGGATAACAAGGATCGGACTAAGAGCCAAG
ACTACTGGGATGCAGAGTTTGTAGGTTCTGTGATCAAGCAGCTGGCAGAG
ATGGTTCGCCGCTCTCAGGAGCCTGAAAAGCTGTTAGAAGAGAACAATTC
GAAAACTGTTCGTCCTCTTGTCACTCGTGCAAGCTTTCTAGACCAT
FMO08343.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18273-RA | 4342 | CG18273-RA | 419..682 | 8..271 | 1110 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 481233..481502 | 277..8 | 1350 | 100 | Minus |
| X | 23542271 | X | 486839..487102 | 271..8 | 1110 | 94.7 | Minus |
| X | 23542271 | X | 478950..479011 | 75..14 | 280 | 96.8 | Minus |
| X | 23542271 | X | 478840..478906 | 271..205 | 245 | 91 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:52 has no hits.
FMO08343.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:50 Download gff for
FMO08343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18166-RA | 241..525 | 1..288 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:38 Download gff for
FMO08343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18273-RA | 414..682 | 1..271 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:37 Download gff for
FMO08343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18273-RA | 414..682 | 1..271 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:37 Download gff for
FMO08343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 481222..481507 | 1..287 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:38 Download gff for
FMO08343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 375255..375540 | 1..287 | 97 | | Minus |
