FMO08344.5prime Sequence
686 bp (686 high quality bases) assembled on 2010-06-02
> FMO08344.5prime
CAGTCGACATGTCAGATAAGATGAAAATGAGCCTTGACGACATTATCAAG
ATGAAATTTAATAAGAACAAGTTTGTTAATGCCAAAAATGAACGTGTTCA
AGGAGGATCGATCAGAAAGCGAAATTCAGAAGGCGGACTTAGAGGAATTC
AAAGGTCCCGCAACGGAACTGGATTCATTCGGAAGAGCAAATTCAAACAG
GAAACCCTTTTGAAGCCGCCAAAAAAACCGACTCTTGTCATGGTTTGCAA
TTTGGATTACGGAGTGGATGATGACGACATCATGGAGCTTTTCAATCAAG
ACGGCGTGGTGGAGAAAGGTTTTGTGCACTATGATCGCGATGGTAACTCA
TTGGGCACCGCTCACTTGTCGTTCAAATATCGCGAAGAGGCCTTCCAGAT
CATCGAGCAGTTCCACGGAGTCCGTTTGGATGGACGCCGATTGAAATTAC
ATCTCGTACAAAACACAAGAAATTTTAAACGCACTGATGTCGATGATCTT
TCCTTGCGGATGGGTTCTTTCAAGACTCGTTTCTTGCAGAATGGTACTTT
TAAGACTCGTTCCTTGCAGAATGGTTTTCAGAAGTCTCGTCTTTTTCGCA
ATAGTTCCTTCAAGCCTCGTCCTTTCAAGAAACATAACTTTAAGTCTCGA
GCGTTCGATACTGATTTCGCAAGCTTTCTAGACCAT
FMO08344.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-RC | 1717 | CG17031-RC | 851..1512 | 7..668 | 3310 | 100 | Plus |
| Ref2-RB | 1511 | CG17031-RB | 645..1306 | 7..668 | 3310 | 100 | Plus |
| Ref2-RA | 911 | CG17031-RA | 45..706 | 7..668 | 3310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12610722..12611383 | 668..7 | 3310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:57:34 has no hits.
FMO08344.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:49 Download gff for
FMO08344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ref2-RA | 16..694 | 1..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:47 Download gff for
FMO08344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 41..719 | 1..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:55 Download gff for
FMO08344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 41..719 | 1..681 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:55 Download gff for
FMO08344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12610709..12611387 | 1..681 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:47 Download gff for
FMO08344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12610709..12611387 | 1..681 | 98 | | Minus |
