FMO08345.5prime Sequence
704 bp (704 high quality bases) assembled on 2010-06-02
> FMO08345.5prime
CAGTCGACATGGCGACAAGGTCTTGTGCGTACAAGGACTGTGAATACTAT
TACGTAGGCCACGAAAACGCGCTGACCAAAGGAAGAACCCTGTTTGCCTT
TCCCAAACAACCGCAAAGGGCGAGAATCTGGCACGAAAACGGCCAAGTGC
ATCCAAAGATTCCCCATAGCCAGCTTTTTATGTGCTCCCTTCACTTTGAC
CGCAAGTTCATATCCTCCTCTAAGAACCGAACGCTCCTCGTCGGCGAGGC
AGTGCCGTTTCCGTACGAGGAAAGCAGTAGCAAGCCGGAGGAGGAGCCCC
AACAAGTGGCTTCCACTTCGCATGAGAGCTACTATATAAACCTGAGCGAC
GATGAGCTCAGCATCAACAATGTGGACACTACCTCAGTTACTACAATTGA
CGCAGTCCACGATAGTCCACCGCAGAAGCGCCCGAAGGAATCTTCCATTG
TCATTGCTCTAAAGGAAGCTGTGAAAATGGAACCCAATCCGAATGCAGGC
CGAGTTAGAGCAGAACCCGACAATATAGATACTACTGAAGTGTCTGTGTT
CAACTTCAAGGGACAGGAGTACGTACAAATGTCTATGGAGTATTACTTGC
AGGAAAAGCGGAAAATGGCTAAACTTTTGCAAGACTATAAAAATGCTTTA
AGAAGCATTAAGAAACATATTTCCCACCTTGACCTTGCAAGCTTTCTAGA
CCAT
FMO08345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip2-RA | 903 | CG9771-RA | 88..765 | 9..686 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4645181..4645568 | 396..9 | 1940 | 100 | Minus |
| 3R | 32079331 | 3R | 4644787..4645076 | 686..397 | 1450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:38:55 has no hits.
FMO08345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:47 Download gff for
FMO08345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 27..711 | 9..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:07 Download gff for
FMO08345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 88..772 | 9..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:02 Download gff for
FMO08345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 88..772 | 9..695 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:02 Download gff for
FMO08345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4644780..4645076 | 397..695 | 98 | <- | Minus |
| 3R | 4645181..4645568 | 9..396 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:07 Download gff for
FMO08345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 470502..470798 | 397..695 | 98 | <- | Minus |
| arm_3R | 470903..471290 | 9..396 | 100 | | Minus |
