FMO08348.5prime Sequence
855 bp (855 high quality bases) assembled on 2010-06-02
> FMO08348.5prime
CAGTCGACATGAATCGCGGCCAGCTTTTAGTTTTGTGCATTTTTGCCACT
GGAATTTCCCTTTCGATGGGTTTTCCCCAGGACGATCTAATTAAGCCGGG
TAGTGACGAATCGGATGTGAGTGGCATTGGCTTCGTGACGCTCGACGGAA
CGGCCAGCGAAGAGAGTGACGAAAGCGACCAAGGCAACGCGTCCGATGAT
TTGATATTTTTGAGTCGCCAAAAGCCAAGTCCGGTCAACAATTCCGTCGA
TTTGAGCGCCTTTGTGGCACTGATTCCTCTGCAAGAAGTCCAGTCCATTG
CTGCTCACTATTATCATCATGATGCGGAGTTTCAAAGGTCGTACGCCTTT
CTCGCCAGCAGCGATTTCGCGGACATCAAGCGGAAAATACTTCAGCTGCC
GGAAGTGCTGGAGTTCACCAACTATCTGGGTAACAATGGACTAGATGTCG
TCAAGGTGATGCATTCGGTGGCAGGAGTGTTCAAACCGTCCATTCTGAGC
TCCGCAGCGGTCAACGAGCCAACAAAAGTCACAACCACCGAAGATGGCAG
CTCCGCCGCTGGAGAAGCACAAACTGGCCTCCATGGAATGGTGGAGAGGG
TCCTGGAAATTCTGCCGCAGGACCAACTGTACGCCCTATTCTTCGACGAG
TTTGAGAGCAACAAACAGTTCGCAGCATTTGTCGACAGCATTAGCAGTCC
AAAGTTTGCCAAGATTTTGAGCGGTTTGCAGAACTCAATGCCGTTGCGAA
ATCTACTATTTGTCCTGCACAATAACAGTATCTATGTGGAGCGGATTGTG
GAGTCCGTAAAATCGTATCTATCCCATTTCCAGTTTTGCAAGCTTTCTAG
ACCAT
FMO08348.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4409-RB | 939 | CG4409-RB | 40..867 | 9..837 | 4120 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16443250..16443757 | 9..516 | 2540 | 100 | Plus |
2R | 25286936 | 2R | 16443907..16444122 | 516..731 | 1080 | 100 | Plus |
2R | 25286936 | 2R | 16444666..16444773 | 729..837 | 495 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:07 has no hits.
FMO08348.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:58 Download gff for
FMO08348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4409-RB | 11..848 | 1..846 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:47 Download gff for
FMO08348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4409-RB | 36..873 | 1..846 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:43 Download gff for
FMO08348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4409-RB | 36..873 | 1..846 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:43 Download gff for
FMO08348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16443246..16443757 | 1..516 | 99 | -> | Plus |
2R | 16443908..16444122 | 517..731 | 100 | -> | Plus |
2R | 16444669..16444779 | 732..846 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:47 Download gff for
FMO08348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12331413..12331627 | 517..731 | 100 | -> | Plus |
arm_2R | 12330751..12331262 | 1..516 | 99 | -> | Plus |
arm_2R | 12332174..12332284 | 732..846 | 95 | | Plus |