FMO08354.5prime Sequence
1131 bp (982 high quality bases) assembled on 2010-06-02
> FMO08354.5prime
CAGTCGACATGAGCTCCAGCAAGATTGCTCTTCTCAGTGTGTCGGACAAG
ACGGGCCTGCTCGACTTGGGCAAGAGTTTGGTGGCACTGGGCTTTGACCT
GGTTGCCAGTGGAGGCACTGCAACTAGCTTGCGTGGCGCTGGCCTGAAGG
TGAGGGATGTCTCGGAGATTACAGGAGCACCTGAGATGCTCGGTGGACGT
GTGAAGACGCTGCACCCGGCTGTGCATGCTGGAATCCTTTCCCGCACCAC
CGACTCTGATCTGGCTGACATGCGCAAGCAGGGCTTCGATCTTATCCAGC
TGGTGGTCTGCAATCTGTACCCCTTCGCCAGCACCGTAGCGAAGCCTGAT
GTTACGCTGGCCGATGCCGTGGAGAACATCGATATTGGAGGCGTTACTCT
GCTCCGGGCGGCTGCTAAGAATCACCAGCGAGTCACAGTTGTCTGCGAAG
CAGTGGATTATGATCGTGTCCTGTCGGAGTTGAAGGCTTCGGGGAATACC
ACCGTGGAGACGCGTCAGGCTCTGGCTCTCAAGGCATTCACGCACACCGC
CACCTACGATGATGCCATCTCAGATTACTTCAGGAAACAGTATGGATCTG
GGGTGTCCCAGCTACCGTTGCGCTATGGCATGAATCCCCACCAGAAGCCG
GCTCAGCTCTACACGCAGCTGGCCAAGCTTCCACTGACGGTCCTCAATGC
CTCGCCGGGATTTATCAACCTGTGCGACGCCCTCAACGGTTGGCAGTTGG
TTAGGGAACTGAAGAAGCTCTGCAGCTGCCGGCGGCCACCAGCTTTAAGC
ACGTTTCTCCAGCGGGTGCGGCTGTTGGAGTGCCTCTAAATCCGGACAGG
CCAAGCTGTGCATGGTGGATGATCTGTACGAGCAGTTGACACCTCTGGCA
ACGGCCTATGCTCGTGCCCGTGGGTGCCGACCGCATGAGCTCCCTTCGGC
GACTTTGTGGGCCTCTCTGATGTGTGCGATGTTGTGACGGCCAAGATATC
TCGCGAAGAGGTGTCCGATGGATTATGGCGCGGGTTATGAGCCCGAAGCT
CTGGAATCCTGAAAAAAGAGAATGGCGCTACTGTTACTTCCGAATGGACC
CACTACGACCCTCGCGGGGAACGCAGAATAT
FMO08354.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11089-RB | 2195 | CG11089-RB | 57..1186 | 8..1125 | 5085 | 97.6 | Plus |
CG11089-RA | 2272 | CG11089-RA | 134..1263 | 8..1125 | 5085 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24879176..24880224 | 27..1072 | 4720 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:22 has no hits.
FMO08354.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:41 Download gff for
FMO08354.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11089-RA | 104..1199 | 1..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:09 Download gff for
FMO08354.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11089-RE | 1946..3041 | 1..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:48 Download gff for
FMO08354.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11089-RA | 127..1222 | 1..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:48 Download gff for
FMO08354.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24879177..24880210 | 28..1058 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:09 Download gff for
FMO08354.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20704899..20705932 | 28..1058 | 98 | -> | Plus |