FMO08359.5prime Sequence
746 bp (251 high quality bases) assembled on 2010-06-02
> FMO08359.5prime
CAATCGACATGGCACAACCAGGCGGAGATCACATGATCATCGCTATCACC
ACACTGTTGGTTTTGATCTGTTCCCTACATCTCGCCAATGCACCCAGCTA
TCATCTACAATCTTACGATCTTGATACGGATAATAGGGCTGCATCTAACT
CCAGCGAGGAGGTGTTCAATGGCGGAGTCACGTCCCTGGAAAGACCTCTT
TCTTGGCTGCGGAATGCCAACAGCGTGTTCGGCAGTCCCGCTGGTCATGT
GGTCATCCAGGTGGCCAAGGAGCTGTTACATCGATCAGCCGGAAACAGTC
AAGTTCTAAGTCTGAATCTGACCAACCTGCTTATCATCATACTCCTGAAA
ATACTTATCTTCTCACCCGGAATGCTGGGCGCTGGGCACTGGAGTGGATA
TGGTTATGGACATGGTCGCTCAGCCGGTCGTAGTGATAACTTCGGTTTGG
GCATAGCTTCTGGAGATGACTATCTTATAACCGGATTTCTCGCCGCCCAA
GGAGCCGGCAGAGATGAGTGCCTCTATGCAGCATCCTGTGCCTGCCCCAC
ATCGGCCTATGAGTACGCGAAAGCAGGACGTGCTCTTATGGGCGCCATTG
AAGTTTTCCAAGGAGTGCCGCTGGAGAAGCCGCGCTACAACGACCTCATC
GTCCTGATGGAGCGAGCCGCCTACGATGGCTTCCGAGGAGTGGCCTGCAA
CACGACCCAGACCTGTGACGGATTGCTTGCAAGCTTTCTAGACCAT
FMO08359.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12420-RA | 855 | CG12420-RA | 61..780 | 9..728 | 3510 | 99.2 | Plus |
| CG12817-RB | 1060 | CG12817-RB | 830..945 | 728..613 | 580 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10223116..10223426 | 303..613 | 1510 | 99 | Plus |
| 3R | 32079331 | 3R | 10222758..10223053 | 9..304 | 1435 | 99 | Plus |
| 3R | 32079331 | 3R | 10223555..10223670 | 613..728 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:37 has no hits.
FMO08359.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:46 Download gff for
FMO08359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12420-RA | 46..773 | 9..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:05 Download gff for
FMO08359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12420-RA | 61..788 | 9..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:27 Download gff for
FMO08359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12420-RA | 61..788 | 9..736 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:27 Download gff for
FMO08359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10223116..10223426 | 303..613 | 99 | -> | Plus |
| 3R | 10223556..10223678 | 614..736 | 97 | | Plus |
| 3R | 10222758..10223051 | 9..302 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:05 Download gff for
FMO08359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6048480..6048773 | 9..302 | 98 | -> | Plus |
| arm_3R | 6048838..6049148 | 303..613 | 99 | -> | Plus |
| arm_3R | 6049278..6049400 | 614..736 | 97 | | Plus |
