FMO08361.5prime Sequence
777 bp (777 high quality bases) assembled on 2010-06-02
> FMO08361.5prime
CAGTCGACATGGTGGTTATCAAGAAGGACAGAGGAATGGCTTCAAATCTC
CAACAGGCAATTCGAACGCATGGTTTTATTTCACTATACGATGGATTAAG
TGCCCAGTTATTGAGACAGCTGACATACACCTCGATGCGGTTTCACCTGT
ACGAAATGGGAAAGGAGCACCTGGATGATCCTGCTGGTTTGTTGGACAAA
GTGCTGGTGGCTGCATTGGCTGGTTGTGTGGCTGGTGTGGTGGGTACACC
CATGGAGTTGATCAACACCCGGATGCAGGTCAATCGCGCGCTGCCCAAGG
AAACGCGGTGGAACTATCGAAACGTCTTCGATGGACTGTACCGTGTGACC
AGGGAAGAGGGCTTTACGAAGCTGTACAGCGGATGTTTCCTCTCCTTTAT
GCGGTCCAGCCTCATCACCATCAGCCAAAATGCTGCTTACGATCAGGCCA
AGCAGATCTACGCAGAATTTTTTCACATGAAGCACGACAACACATTGCTG
CACCTGATAAGTTCCGTGACGGCTGCTTTCGTCTGCGGTCCAATCATCAA
GCCCATTGAGAACTTGAGATACCTCAGAATGGTGGATTCAAGAAGATTGA
TAAATTCCATTTCCTATATGATGCGCTTCGGAAGTCGCGGACCTTTTCGC
GGTATGGTGCCCTATGTTTTGCGCATGGTACCCAATACGGTCATTACTTT
TTTTAAGTTTCGAGCAGCTTCGTGTTAATTTTGGGTACATTGAAATTGAA
GATGATGAAGCAAGCTTTCTAGACCAT
FMO08361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6893-RB | 1164 | CG6893-RB | 284..1033 | 9..759 | 3730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18694767..18695142 | 72..447 | 1880 | 100 | Plus |
| 3L | 28110227 | 3L | 18695203..18695517 | 444..759 | 1530 | 99.7 | Plus |
| 3L | 28110227 | 3L | 18694524..18694589 | 9..74 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:27:14 has no hits.
FMO08361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:30 Download gff for
FMO08361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:02 Download gff for
FMO08361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:30 Download gff for
FMO08361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6893-RB | 279..1033 | 1..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:30 Download gff for
FMO08361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18694519..18694587 | 1..72 | 95 | -> | Plus |
| 3L | 18694768..18695141 | 73..446 | 100 | -> | Plus |
| 3L | 18695206..18695517 | 447..759 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:02 Download gff for
FMO08361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18687619..18687687 | 1..72 | 95 | -> | Plus |
| arm_3L | 18687868..18688241 | 73..446 | 100 | -> | Plus |
| arm_3L | 18688306..18688617 | 447..759 | 99 | | Plus |
