Clone FMO08362 Report

Search the DGRC for FMO08362

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34445-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08362.5prime Sequence

428 bp (428 high quality bases) assembled on 2010-06-02

> FMO08362.5prime
CAGTCGACATGACGACAACGCTGCCGGAGAAGGAAGCGGAAACGCAGCAG
GAGATCAGGGAGCGGGAGGCCAAGGCTCTGGAGGACCGAAAGGAGCGCAA
GATCTACGAGAACTTTGCCACGCCCCTGGCAGGCACTTTTCTCAACCTGC
CACGCGAGCCCGTGGAGATCGAGTGCCCCGCCTGCGGAATCAAGGATCTG
AGTGTGGTGCAAAATGATCTGAAGTGGTGGGCCAGTGAACTAAACCGCAT
TGTGGGATGTCTTTTTGTGACCTTCTGCTGCTGCTGCTGCTTTAATTACT
ATGTGCCGTGCAAACAAACCGATCGAAGTCATTACTGCGGCAATTGCGGC
TGTTACTTTGGACGTTCCATGAAGAGGAGGCAACCACTCAAATTGAAGGC
AACCACCGCCGCAAGCTTTCTAGACCAT

FMO08362.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG34445-RA 527 CG34445-RA 25..427 8..410 2015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22648193..22648454 269..8 1310 100 Minus
2R 25286936 2R 22647992..22648133 410..269 710 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:04:38 has no hits.

FMO08362.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:28 Download gff for FMO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 13..427 1..416 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:29 Download gff for FMO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 18..432 1..416 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:29 Download gff for FMO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 18..432 1..416 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:29 Download gff for FMO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22648194..22648460 1..268 98   Minus
2R 22647987..22648133 269..416 97 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:29 Download gff for FMO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18535699..18535965 1..268 98   Minus
arm_2R 18535492..18535638 269..416 97 <- Minus