Clone FMO08365 Report

Search the DGRC for FMO08365

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:65
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14247-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08365.5prime Sequence

584 bp (584 high quality bases) assembled on 2010-06-02

> FMO08365.5prime
CAGTCGACATGCTCCGTTGGCTGTTCGTGATGAAATTATTTATGAAAAAT
AAATGGAGTAACTTCCCCCGGATTCTGCTCCTGATCCTGATCCTGACCAT
GCTGCAGCTGCTGCAGCAGGGTGTGGCAGCCACCACCGACCCTGACACAA
CCACGAATGCAACATGCAGACATGCCACGGACATGTGGGGAGATCCGGAC
CCCAACATATTCTACGTGTGCTCCGATGGCGGACAACCGCTGCAGCTGGA
GTGTCCGCCTGGCCGGGGATTTTTCAGCGGTCTCGGTTATCTGGGCTGTT
TGCCCTATGACCACTGGCCAGCCTGCCGCCCCTCGGAGGAGCAGGTGGCC
GCCCAATTGTCAGCTGGCTGTGACACCACTACCGGCATCGTGCCATCGCC
CTGGGCCTCGCCGGATCCCAACCGATTCTACCTGTGTCCCAGCATAAATG
CCACACCTCTGCTGCTCAACTGCGCCGCCGGTAGTGGATTCGTGTCCAGT
TCCGAGGTGGTGGGCTGTGCGGACTGGTCACAATGGCGCCGCCAGATGGA
GTGCGAGGCGTACTACGCAAGCTTTCTAGACCAT

FMO08365.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-RA 984 CG14247-RA 200..757 9..566 2790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26737809..26738366 9..566 2790 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:33:59 has no hits.

FMO08365.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:24 Download gff for FMO08365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..741 9..566 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:47 Download gff for FMO08365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..741 9..566 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:17 Download gff for FMO08365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 200..757 9..566 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:17 Download gff for FMO08365.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26737809..26738366 9..566 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:47 Download gff for FMO08365.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22563531..22564088 9..566 100   Plus