FMO08369.5prime Sequence
491 bp (491 high quality bases) assembled on 2010-06-02
> FMO08369.5prime
CAGTCGACATGGAGCTCTCGTTGGATGAACCGCAATGCGCATCCTTCTTT
TGCATCCTGGGTGCCGTGTGCGCCATTGTCTTTTCGACATTGGGAGCCGC
CTACGGAACAGCGAAGGCTTCTGTGGGAATCTCTTCGATGTCAATCAAGC
ATCCGCAGCTGATCATGAAGGCGATTGTTCCAGTGGTTATGGCTGGCATT
ATAGCCATTTATGGACTGGTGATCGCGGTCCTGCTTGCTGGATCACTTAG
CAGCCCCTATAGCGCCTACAAGGGTTTCCTAAACCTCAGTGCTGGACTGG
CGGTGGGAGTCTCTGGGATGGGGGCTGGAATTGCTATTGGCGTGGTGGGC
GAAACTGGAGTCCGTGCCTCTGCCCAGCAGCCAAAACTCTTTGTGGCCAT
CATTTTAATATTGATATTTGCCGAGGTCTTGGGTCTGTATGGTCTCATAG
TGGCCATTTATTTGTTTTCCAAGGCAAGCTTTCTAGACTAT
FMO08369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha16-4-RA | 567 | CG9013-RA | 47..511 | 9..473 | 2295 | 99.6 | Plus |
| Vha16-3-RB | 633 | CG32090-RB | 229..529 | 160..460 | 230 | 72.2 | Plus |
| Vha16-3-RA | 587 | CG32090-RA | 183..483 | 160..460 | 230 | 72.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16947714..16948178 | 473..9 | 2295 | 99.6 | Minus |
| 3L | 28110227 | 3L | 11473727..11473868 | 319..460 | 215 | 76.8 | Plus |
Blast to na_te.dros performed 2014-11-28 23:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2161..2253 | 431..342 | 115 | 61.3 | Minus |
FMO08369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:20 Download gff for
FMO08369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15614-RA | 1963..2427 | 9..473 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:23 Download gff for
FMO08369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha16-4-RA | 47..511 | 9..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:53 Download gff for
FMO08369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha16-4-RA | 47..511 | 9..473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:53 Download gff for
FMO08369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16947714..16948178 | 9..473 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:23 Download gff for
FMO08369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12835219..12835683 | 9..473 | 99 | | Minus |
