Clone FMO08374 Report

Search the DGRC for FMO08374

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:74
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34107-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08374.5prime Sequence

368 bp (368 high quality bases) assembled on 2010-06-02

> FMO08374.5prime
CAGTCGACATGTGCGAACAGTACTGTGACAAGTTTGAGACCTTCAATCCG
GAGGTTGAGTTTGCCAAGTTTCAAAAACGCAAGCCTGTCGTAAGGACTGC
CCAACTCTATGAGAATTTGCACAAGCGGGAGGATATCAAGTGTCCCTACA
GCTTCAAAGGTTATGGCGTGGAGACGGATTCCAATACAATGTACCGCACT
TGCAACTCCGAATATGGTTACTATGCACCCAATGCCTATACCATACCCAA
GCGTTTCTATCCATTGCCCCAGAGTTTCTCCAATGAAGTCGTGCGTTTCG
GCATGTATCGCAATTTCTCCCTGAACACACATATGGATCGTACCTTCTAT
GCAAGCTTTCTAGACCAT

FMO08374.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34107-RA 611 CG34107-RA 58..399 9..350 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10225173..10225375 148..350 1015 100 Plus
3R 32079331 3R 10224966..10225104 9..147 695 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:38:50 has no hits.

FMO08374.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:15 Download gff for FMO08374.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34107-RA 51..399 1..350 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:03 Download gff for FMO08374.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34107-RA 51..399 1..350 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:59 Download gff for FMO08374.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34107-RA 51..399 1..350 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:59 Download gff for FMO08374.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10224959..10225104 1..147 97 -> Plus
3R 10225173..10225375 148..350 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:03 Download gff for FMO08374.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6050681..6050826 1..147 97 -> Plus
arm_3R 6050895..6051097 148..350 100   Plus