FMO08377.5prime Sequence
587 bp (587 high quality bases) assembled on 2010-06-02
> FMO08377.5prime
CAGTCGACATGCCGGGAATCCTATTGCCACTGGCGCTATTGGCCCTCGTT
TCAAATGGCGCAGCCATCAGGTGTTATGTCTGCGATTCCAGTGATAATCC
CAGTTGCGCCGATCTGGGCTCGAATTCCAGCATAGTGGCGGAGGAATGCA
CTTTGGACAAAATGAAATCGCTGGACACCTGGCTATTTGACTTGAATAAG
TTCTCATATTTCGATAATGGCGCCAACAAAAGTCCGCTCATGAATTGCCA
AAAAGTTGTGGCCAAAGACCCTGATACAAGGAAAGTGGTGACGGCGCGCT
TCTGCCAACTGGACACCGGCGACTCGGATGCCTGCGAGATCCTGCGTACC
AAGCTTCGCATCCCGAGCCCCGAGGAGCGGGAGCAGCGGAATCGCAACCA
AAACAAGCGAAGGAAGGGTCACGGCCAGGATGCGGAGGAGGATGACGAAA
TCTCCGCAGAGGATGCGTTCTTCTGCGGCATCTGTAAATCGCATCGCTGC
AATGGTGCGGCGGCCGTAACGCTTTCCTTGGCTACGATTCTGGCCATGAT
TGCGCTCCAATTGGGCTGCGCAAGCTTTCTAGACCAT
FMO08377.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14274-RA | 1608 | CG14274-RA | 153..714 | 8..569 | 2810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8340864..8341162 | 271..569 | 1495 | 100 | Plus |
| 2L | 23513712 | 2L | 8340182..8340314 | 142..274 | 650 | 99.2 | Plus |
| 2L | 23513712 | 2L | 8338579..8338666 | 57..144 | 440 | 100 | Plus |
| 2L | 23513712 | 2L | 8338439..8338489 | 8..58 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:10 has no hits.
FMO08377.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:13 Download gff for
FMO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14274-RA | 122..694 | 3..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:58 Download gff for
FMO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14274-RA | 147..719 | 3..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:37 Download gff for
FMO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14274-RA | 147..719 | 3..575 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:37 Download gff for
FMO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8338433..8338488 | 3..57 | 94 | -> | Plus |
| 2L | 8338580..8338665 | 58..143 | 100 | -> | Plus |
| 2L | 8340184..8340310 | 144..270 | 100 | -> | Plus |
| 2L | 8340864..8341167 | 271..575 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:58 Download gff for
FMO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8338433..8338488 | 3..57 | 94 | -> | Plus |
| arm_2L | 8338580..8338665 | 58..143 | 100 | -> | Plus |
| arm_2L | 8340184..8340310 | 144..270 | 100 | -> | Plus |
| arm_2L | 8340864..8341167 | 271..575 | 99 | | Plus |
