FMO08380.5prime Sequence
452 bp (452 high quality bases) assembled on 2010-06-02
> FMO08380.5prime
CAGTCGACATGGAAAAGGCAGCTGGTTTTGTTATTTTTCGCCGCCTTTGT
GGGGAAATACAATACCTATTGCTGAAGGCTTCCTACGGCTCCTTCCACTG
GAGTTCTCCCAAGGGACATGTGGACCCAGGCGAGGATGATTTTACCACTG
CCCTGCGAGAAACGAAAGAGGAAGCCGGGTACGACGAGAAGGATCTGATC
ATATACAAGGACACTCCGCTGACCCTGAATTATCAGGTGCAAGACAAGCC
GAAGATTGTTATTTACTGGCTAGCGGAGCTGCGGAATCCCTGCCAGGAGC
CCATTCTCTCCGAGGAGCACACCGACCTCAAGTGGCTGCCCAAGGAGGAG
GCCAAGCAGTGCGTCGGCTTTAAGGATAACCAAGTCATGATCGACAAGTT
CCACCAAATGATTTTAGATCAAAACAAACCAATGGCAAGCTTTCTAGACC
AT
FMO08380.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-RA | 555 | CG31713-RA | 51..478 | 7..434 | 2140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9938255..9938511 | 434..178 | 1285 | 100 | Minus |
2L | 23513712 | 2L | 9938568..9938740 | 179..7 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:05 has no hits.
FMO08380.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:09 Download gff for
FMO08380.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 43..481 | 1..441 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:18 Download gff for
FMO08380.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 46..484 | 1..441 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:41 Download gff for
FMO08380.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 46..484 | 1..441 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:41 Download gff for
FMO08380.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9938249..9938510 | 179..441 | 98 | <- | Minus |
2L | 9938565..9938745 | 1..178 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:18 Download gff for
FMO08380.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9938249..9938510 | 179..441 | 98 | <- | Minus |
arm_2L | 9938565..9938745 | 1..178 | 96 | | Minus |