Clone FMO08381 Report

Search the DGRC for FMO08381

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:81
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG16957-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08381.5prime Sequence

602 bp (602 high quality bases) assembled on 2010-06-02

> FMO08381.5prime
CAGTCGACATGGCTGAGAGCTCCAAGGGCATGGAACACACCACCAGCTGG
TACTGCAAACTTTACAATTCCCTTAAGGAAACACCCATCGATGTCACCCT
TTTGATCATGTCGATCGTCGTGTTCCTCAAGTTGGGATTTTTTGCGCGTC
GTCTGAGCCGCGAGGAACCAGACTTCAGTGATGATAATAATCAGGAAGTG
GATCTTCCGCCACTGCGGAAGGACTTTACGGTTCGGGAACTTCGGGAATA
TGACGGCACACGGGCGGACGGTCGCATCCTAGTGGCCATCCTTTTCAACA
TCTACGATGTCTCGCGATCCGTTCACTATTACGGACGAAATGGCGTTAAT
CCAAACTATGCCGGTCGGGATATTTCGAGGATTTTGATCAATTCACCAGA
GGACTTGAAGGACAGCGAGGATTTTGATGATTTGAGCGACCTCTCACGCA
ACCAAATGAACACATTACGAGAGTGGGAACAGCGGTACAAGATGAAGTAC
CCATTTGTTGGAAAGCTCAAGGAGAAACTACAAATCAATGAAGAGGAGGA
TTTTGAGCTGCAGCAAGCGGATCCGCTGGTGGACGCAAGCTTTCTAGACC
AT

FMO08381.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG16957-RB 778 CG16957-RB 84..659 9..584 2880 100 Plus
CG16957-RA 825 CG16957-RA 84..659 9..584 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13395526..13396101 584..9 2880 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:59:03 has no hits.

FMO08381.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:07 Download gff for FMO08381.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16957-RA 80..662 1..588 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:17 Download gff for FMO08381.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16957-RA 80..662 1..588 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:41 Download gff for FMO08381.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16957-RA 80..662 1..588 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:41 Download gff for FMO08381.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13395522..13396105 1..588 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:17 Download gff for FMO08381.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13395522..13396105 1..588 98   Minus