FMO08382.5prime Sequence
530 bp (530 high quality bases) assembled on 2010-06-02
> FMO08382.5prime
CAGTCGACATGAAGGATCGATTCAAGTGGTTGTCGCTGGAGCTGCTCCTG
CTGATAGGCGCCGCAGTCGCCTTTCCGGACGGCGCTCCGGCGGACACGTG
CGTGAAGCAGCGGGCGAATCAGCCGAATCATGGCAAGGCCCGGAGTCAGC
CGGCTCACTCGAATCCGTACGAGGTGGTGGCCGATGCGCAGACCTACCAT
CCCGGCCAGCAGATATCGGTGGTCATCTACCCGCACTCGGACCAGAGCAC
CGTCTTCCGGGGATTTTTCCTGCAGGCGCGTGATGCCAACTCGAACGAGT
GGATCGGCGAGTGGGTGCAGAGCGAGAACACCAAGACCATTCCAGAGTGC
TCGGCCATTACGCACTCGGACAACCGGGACAAGCTGGGCGCCAAGCTCAT
CTGGAAGGCACCGCAAAATAAGCGGGGACAAGTCTACTTCACTGGCACTG
TGCTACAGGAGTACGGAACGTTTTGGAGCGACATTGTGAACAAAGTGCAG
GCGGAGCGGCCAGCAAGCTTTCTAGACCAT
FMO08382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14515-RA | 639 | CG14515-RA | 78..582 | 8..512 | 2495 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29197633..29198067 | 8..442 | 2160 | 99.8 | Plus |
| 3R | 32079331 | 3R | 29199086..29199154 | 444..512 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:13:38 has no hits.
FMO08382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:19 Download gff for
FMO08382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14515-RA | 45..560 | 1..519 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:27 Download gff for
FMO08382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14515-RA | 72..587 | 1..519 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:50 Download gff for
FMO08382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14515-RA | 72..587 | 1..519 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:50 Download gff for
FMO08382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29197627..29198067 | 1..442 | 99 | -> | Plus |
| 3R | 29199085..29199159 | 443..519 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:27 Download gff for
FMO08382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25023349..25023789 | 1..442 | 99 | -> | Plus |
| arm_3R | 25024807..25024881 | 443..519 | 94 | | Plus |
