Clone FMO08384 Report

Search the DGRC for FMO08384

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:83
Well:84
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15471-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08384.5prime Sequence

410 bp (410 high quality bases) assembled on 2010-06-02

> FMO08384.5prime
CAGTCGACATGGCCAGCCTGACGGAAGATCGGGGTCCCAATATCTGCAAC
TGTAGTCGAATGCGATCCGAGTGCTGGACAAGACATTCGATCACCGCCGA
GGACACGATGACTCGTCTGGCTTTAAAGTACGACACGAGCATTGGGCGCA
TATGCAGGGCCAATCGAATGCACAGCCAGGATGTCCTGCAGGCACGCCGT
CACGTTTGGGTGCCCATTCCAAACAGTCAGTTTCAGATGGGGTGTCAAGA
GAAATCAGAGTCCGACGAAAGTCCGGAGATCTCTATCAGAAAAGTTACGC
CGAACTTGCCGTCACATTTTTATCGCCAAAGCGATCCAAATCCAAATCCT
TTTGCTTGCGATGACGATCCGCTGCTGGTCATCACAGATATGGCAAGCTT
TCTAGACCAT

FMO08384.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-RC 528 CG15471-RC 56..439 9..392 1920 100 Plus
CG15471-RB 535 CG15471-RB 33..416 9..392 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4782320..4782703 392..9 1920 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:07:43 has no hits.

FMO08384.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:22:16 Download gff for FMO08384.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 16..412 2..400 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:10 Download gff for FMO08384.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 29..425 2..400 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:30 Download gff for FMO08384.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 29..425 2..400 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:30 Download gff for FMO08384.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4782314..4782707 2..396 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:10 Download gff for FMO08384.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4676347..4676740 2..396 98   Minus