FMO08402.5prime Sequence
996 bp (776 high quality bases) assembled on 2010-06-07
> FMO08402.5prime
CAGTCGACATGGAGAAGAAGGCCAAGGAGTCGCTGCGCCGCTACAAGAAG
GCCGCCCGTCACAGTGCGACGCACTCGAGCAGCTCGGACTCCACCTCGGA
CTCCGACAGCGGGAGCAGCTCGTACAGCAGCACGGACAGCGAGCAGGGCG
TGGGCGGCGTCGGCGTGGGGGTGGGCGTACCTGGTGGCGCCGGTGGTCCC
GGCGGCAGTGGCAGCGTCCACGGTCATCCCCATACCCACGGCCATGGGCA
TCATCCGCGCTCCGCGGAGCGTCATCATCGCAAAAAGAAGAGCTCACGGC
GCGGCGGCAGCTCGTCCGGAGATGAACCATCGTCGTCGCGCCGCAAGCGA
GACAAACGGGATCATGTGCAAAAGAAGCTGGTGGCCAAGCGAAATCATAT
CAAACGGAAACTGAAGGAAGCGCGCCTTAAGAAACGGGCGGCCGCCGCCC
TCAGTGGTCACGTCCATCGTTCCCTGTCGCCGACGACGCGAGCCAAGCTA
AAGAAGCTGGCCGAGCGAAAGAGGCTACGGGCTGCCAGCAAGGAGCAACG
GGAGCGGGACAAGCTGCGCGTCTTCCAACGAGACAGAGAGCGAGACCATC
ATCGATTGGGCAGCAGTAGGAGTCCGCCGAGCAGCAGCACTACCACCACC
ACCAAGATTCGCATCCATCAGGACATCGTGGGTAAGCGGCAAAAGAGTCT
AGGTTTATGTTCTGGTCTTGGAGGCGGTAGCTGCAGCTCTTCCTCGCGAA
TGCATCACCAACTGATGTCGCGAGAGATGATCTTCATCCAGACCCGCGCA
CGTGGACGTTCTCCGTCCCTGGGAACGGGACTGGGAAAGGGAACGCGAGC
GAAAACGAGAATGAAAGCGCGAACGCCACTATCTCTCTTTGCGTGTGCGA
GATCGTCGGGTTTGGGATGGCGAGTGTGCGGATCGGAATGCACCCGGGAT
AGTAGCTTGGTTAAGCCTTTGGTTCTTGCATGAACTTAAGTGGAGC
FMO08402.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7358-RC | 4147 | CG7358-RC | 185..1127 | 9..951 | 4250 | 96.8 | Plus |
| CG7358-RB | 3919 | CG7358-RB | 185..1127 | 9..951 | 4250 | 96.8 | Plus |
| CG7358-RA | 3952 | CG7358-RA | 185..1127 | 9..951 | 4250 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18892757..18893452 | 704..9 | 3450 | 99.7 | Minus |
| X | 23542271 | X | 18892453..18892687 | 936..701 | 785 | 89.8 | Minus |
Blast to na_te.dros performed 2014-11-28 18:59:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 594..658 | 637..703 | 114 | 65.7 | Plus |
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 8443..8507 | 637..703 | 114 | 65.7 | Plus |
FMO08402.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:51 Download gff for
FMO08402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7358-RA | 175..1104 | 1..932 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:03 Download gff for
FMO08402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7358-RA | 178..1107 | 1..932 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:05 Download gff for
FMO08402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7358-RA | 178..1107 | 1..932 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:05 Download gff for
FMO08402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18892759..18893457 | 1..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:03 Download gff for
FMO08402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18786792..18787490 | 1..702 | 99 | | Minus |
