FMO08405.5prime Sequence
715 bp (633 high quality bases) assembled on 2010-06-07
> FMO08405.5prime
CAGTCGACATGAGTTACATGCCAGCCCAGAATCGAACCATGTCGCATAAT
AATCAATACAATCCACCTGATCTGCCGCCGATGGTATCCGCCAAGGAGCA
GACCCTCATGTGGCAGCAGAATTCGTACTTGGGCGACTCCGGCATCCACT
CGGGTGCCGTGACCCAGGTTCCATCGCTGTCTGGCAAGGAGGACGAGGAG
ATGGAGGGAGATCCACTTATGTTCGACCTGGACACCGGTTTCCCGCAGAA
TTTCACACAAGACCAAGTGGACGATATGAACCAGCAACTGAGCCAGACAC
GCTCCCAACGTGTACGTGCTGCCATGTTTCCGGAAACCCTGGAGGAGGGC
ATTGAGATTCCCTCCACCCAGTTTGATCCCCAACAGCCGACGGCAGTGCA
ACGTCTTTCGGAACCGTCACAAATGCTAAAGCACGCGGTGGTCAATCTGA
TCAACTACCAGGACGACGCTGAGCTGGCAACCAGGGCCATACCCGAGTTG
ATCAAGCTGCTGAACGATGAGGATCAGGTGGTAGTTTCCCAGGCCGCCAT
GATGGTCCACCAGCTGTCTAATAAGGAGGCCTCGTGACATGCCATTATGA
ACAGCCCTCATATGGTAGCCGCTTTTGGTGCGTGCTATCTCTAACAGCAT
CGATCTGGAGAGCACCAAGGCTGCGGTATGAACACTGCACAACTTATCAC
ACCATCTCTGGGTCT
FMO08405.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| arm-RF | 3211 | CG11579-RF | 251..947 | 9..706 | 3360 | 98.9 | Plus |
| arm-RE | 3116 | CG11579-RE | 156..852 | 9..706 | 3360 | 98.9 | Plus |
| arm-RB | 3220 | CG11579-RB | 260..956 | 9..706 | 3360 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1896088..1896753 | 706..40 | 3180 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:28 has no hits.
FMO08405.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:48 Download gff for
FMO08405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm-RD | 154..867 | 1..715 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:21 Download gff for
FMO08405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm-RB | 253..966 | 1..715 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:42 Download gff for
FMO08405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm-RB | 253..966 | 1..715 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:42 Download gff for
FMO08405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1896078..1896753 | 40..715 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:21 Download gff for
FMO08405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1790111..1790786 | 40..715 | 98 | <- | Minus |
