FMO08414.5prime Sequence
1103 bp (969 high quality bases) assembled on 2010-06-07
> FMO08414.5prime
CAGTCGACATGGCCCACGAGGGGGAGCAGTTCATCAAGGACATACAACGC
GAGTATGTGGACTTTCTGGACGACGAGGAGGATCAGGGCATCTATGCGGG
CCACGTCAAGGATATGATCGCGGAGAAGAGCAAGCGCCTGATCGTGAATG
TCAACGATCTAAAACGCAAGAATCCGCAACGTGCATTGGGGCTACTGAGC
AACGCGGCGGATGAGCAGCTGGCCTTTGGCAGGGCGCTCAAGGAGTATGC
GTCCACGGTTGATCCGGGCTATGCCAAAATGCATGAGGATCTGTTTGTCG
GCTTCGAGGGCTGCTTTGGCAATCGGCATGTGACGCCGCGCTCCCTCACC
TCCATCTATCTGGGCAACATGGTGTGCGTGGAGGGCATTGTTACCAAGGT
ATCGCTGATTCGTCCCAAGGTGGTGCGCAGCGTTCACTATTGCCCCAATA
CGCGTAAGGTAATGGAGCGCAAATACACCGATCTCACATCGTTCGAGGCT
GTGCCATCTGGCGCTGCCTATCCCACAAAGGACGAGGATGGCAATCTGCT
GGAGACCGAATACGGTTTGTCCGTTTACAAGGATCACCAGACGCTGACCA
TTCAAGAGATGCCCGAGAAGGCGCCGGCTGGCCAATTGCCGCGTTCGGTG
GATATTGTGTGCGACGACGATCTCGTGGATCGCTGCAAGCCCGGCGATCG
TGTACAGATTGTGGGCAGCTATCGCTGTTTGCCGGGCAAACGCGGTGGCT
ACATCTCGGGCACGTTCCGCACCGTGCTGCTGGCCAACAATATATCGCTG
CTCAGCAAGGAGAGCATTTGGACATATCGCGCGAAGACATCATGCTGTGC
AAGAAGCTAGCGAGAATAACGACATCTTCTAGCTGCTCAGCAAGAGTTTG
GCGCCCTCGATTCATGGACATGCCTATGTGAAGCAGGCCATTCTTTGCCC
TCTGCTCGGCGCGTTGAGAAGATCCTGCCGAATTGCCACACGCCTGCGTG
GCGATATTATGTCTGTCTATCGCGTGTTTCTCGGTGGTCCAGTTCAGCTA
CTGCGCATCGTCTTGATACGGACCAGGGCCATACCGACAACGGTGCTCGG
GAT
FMO08414.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm3-RB | 2744 | CG4206-RB | 143..1235 | 9..1093 | 4950 | 97.5 | Plus |
| Mcm3-RA | 2747 | CG4206-RA | 143..1235 | 9..1093 | 4950 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5323997..5324999 | 9..1009 | 4745 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:44 has no hits.
FMO08414.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:35 Download gff for
FMO08414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm3-RA | 106..1213 | 1..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:42 Download gff for
FMO08414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm3-RA | 137..1244 | 1..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:37 Download gff for
FMO08414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm3-RA | 137..1244 | 1..1103 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:37 Download gff for
FMO08414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5323991..5325098 | 1..1103 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:42 Download gff for
FMO08414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5218024..5219131 | 1..1103 | 96 | | Plus |
