FMO08417.5prime Sequence
1156 bp (1056 high quality bases) assembled on 2010-06-07
> FMO08417.5prime
CAGTCGACATGACTTCCGATATCGCCATGCAATTGATTGCCATTTTGGAA
AAGACGGTGTCGCCAGACAAAAATGAGCTGCTATCGGCGAAGAACTTTCT
GGAGCAGGCGGCGGCCAGCAACCTGCCCGAGTTTCTCAAGGCGCTGTCAG
AGATACTGGTGAACACGGCCAACAGTGCGGTGGCGCGAATGGCAGCCGGT
CTCCAGCTGAAGAACCACCTGACCAGCAAGGACGAGAAGGTCAGCCAACA
GTACCAGGACCGCTGGCATCAGTTTCCCAGCGAGATCCGCGAGTTGATCA
AGAATAACATCCTGGCTGCTTTGGGTACCGAGAACACCCGACCCTCCTGC
GCCGCCCAGTGCGTGGCCTATGTGGCCGTGATTGAGCTGCCGATAAACCG
CTGGCCCATGCTCATCCAGACACTGGTGAACAAGGTGGTCAGCGAAGGAT
CCAGCGAGATGCATCGCGAGTCGGCGCTGGAGGCCATTGGCTACATTTGC
CAGGACATTCGTTTCGGCGTCATGGAGAACCAGTCGAACGATGTGCTGAC
TGCTATTATTCACGGCATGAGAAAGGTAGAGCCGAGCAATCATGTACGCT
TGGCGGCCACCACGGCCCTTCACAACTCGTTGGAGTTCACCAAATCGAAC
TTTGAGAAGGACATGGAGCGCAACTTCATCATGGAGGTGGTGTGCGAGGC
CACTCAGTGCCAGGACTCGCAAATCTGCGTTGCCGCTCTGCAGTGCCTGG
TGAAGATTATGACCCTTTATTACCAGTACATGGAGCCCTACATGGCACAG
GCTCTTTTCCCTATCACTTTGGCGGCCATGAAGTCTGATAACGATGCTGT
AGCGCTGCAGGGCATAGAGTTCTGGTCGAACGTCTGCGATGAGGAGATAG
ATCTGGCCATCGAAAGCCAGGAGGCCACTGATCAGGCCGCGCTCCGCAGA
GAGTGTCCAAGCACTATGCTCGAGGTGCTCTGCAGTTCCTGACGCCTGGT
GCTCGTCGAGAAATTACCAGCAGGCCGAGTGGCGATGACGAGACACTTGG
AGCCCGGCGAAGGCCGCCTCGGTTGGCCTTATGGTGCTGGCCACATGGTT
GGCAAGACAGAATCGTGTCCATGTTGCTTCCCTTTCATCAAGAAATACTC
AGATCA
FMO08417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fs(2)Ket-RE | 4699 | CG2637-RE | 298..1434 | 6..1142 | 5235 | 97.9 | Plus |
Fs(2)Ket-RC | 5571 | CG2637-RC | 298..1434 | 6..1142 | 5235 | 97.9 | Plus |
Fs(2)Ket-RB | 3783 | CG2637-RB | 480..1616 | 6..1142 | 5235 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20736418..20737208 | 309..1097 | 3580 | 98.2 | Plus |
2L | 23513712 | 2L | 20736100..20736344 | 64..308 | 1210 | 99.6 | Plus |
2L | 23513712 | 2L | 20735370..20735430 | 6..66 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:27 has no hits.
FMO08417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:31 Download gff for
FMO08417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fs(2)Ket-RA | 290..1399 | 1..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:14 Download gff for
FMO08417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fs(2)Ket-RB | 476..1585 | 1..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:09 Download gff for
FMO08417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fs(2)Ket-RB | 476..1585 | 1..1111 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:09 Download gff for
FMO08417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20736103..20736344 | 67..308 | 99 | -> | Plus |
2L | 20735366..20735430 | 1..66 | 95 | -> | Plus |
2L | 20736418..20737220 | 309..1111 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:14 Download gff for
FMO08417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20735366..20735430 | 1..66 | 95 | -> | Plus |
arm_2L | 20736103..20736344 | 67..308 | 99 | -> | Plus |
arm_2L | 20736418..20737220 | 309..1111 | 97 | | Plus |