FMO08418.5prime Sequence
1156 bp (1062 high quality bases) assembled on 2010-06-07
> FMO08418.5prime
CAGTCGACATGGATTTACAGCAGCTGGAGGAGCAGGCTCGCCAGGCAGCG
CTCAAGGACATACAGAACATGTTGCAGCGACCAGGTCAACTGGAGAAGGT
GGAACAATATCGCCACCGAATCGCCCGGAAGAAGGCATCCGTTGAGGCGC
TCCTTAAGACCGGAATGCAAGGACAGCTGGACGGGGTCAGGGTGGGACTT
AAGCAGTTGGAGACCTGCATGCAGGACGTGCGCGAGGTAAGGCGTCGAAT
GGACGAGGTGGAGCGCCTGCTGAGGGGCGTTCCCGAAGTCTACGACGCTT
TGGAAGTTGTGCGGGAGGAAAACACAAAGCACTCCCAGTACGCCACCGCC
ATGGAGAATCTGAAGCACATCTTCAACGTAGATGCCAGCGTACAAAAGAC
GATGGCGCTGATCGAGGATGATAAGCTGCTTAATGCCCATCAGTGCCTGG
CGGATCTGGAGAATTCGCGGGATGATCTTCCCTACGAACTGCACAAGCAG
CCCAAGCAGCATGCGTCCGACAAGATCACCCTAAAGCGTCACTTCGAGAA
GGTTGACACGGTATCCCAAGAGCTGGAGAAAAAGCTGCGACTCATTCTTA
GCCGCACGCTGAACACTCTGCGCAAGAAGCCCACCATCATCGTTACCGCC
CTACGCATCATAGAGCGGGAAGAGAAAAAACGACCAGTTCGCGTTGCAGC
AGCAAAAGGTCACAGGATTCCTGCCGCCTGGAAGACCAAAGGCTTGGCGC
CGCATGATCATGGACGTGCTACAACAGTCGGTGATAACGCGCATAGAGGG
ATCCAAGCTAGAGGAGCGGGCCGATAACAAGATGTGGTTAGTACGAGACC
TGGAGATATTGCGTCAAATCATTCTCGAGGATCTGCGCGTTGTGAAGTCC
CTTTGTGTGCCCTGCTTCCCGCCGCACTACGACATTTTCGGCGAATATGT
CAAGTTCTATCACGAAGGACTTTCTAGCTATCTTGACACATTGTGCGCTC
GGGCTTGGAGGGCAATGATATGTATCAATGATGGCCTTGGGTTAACCACC
ACCTATCCTGGCGTCAGCCTGATGTCCCATCCGGATCTTAAGGGGATGTA
CACCGAACGATAGGTACTCTGCTTGCGTCGGAACATCTCAAGCGCCTGGA
GAATGA
FMO08418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec6-RA | 2405 | CG5341-RA | 95..1227 | 9..1141 | 5350 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18625343..18626314 | 9..981 | 4800 | 99.8 | Plus |
| 2R | 25286936 | 2R | 18626387..18626540 | 988..1141 | 385 | 89.1 | Plus |
Blast to na_te.dros performed 2014-11-28 19:00:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G6 | 2042 | G6 G6_DM 2042bp | 512..578 | 616..686 | 111 | 68.1 | Plus |
FMO08418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:28 Download gff for
FMO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec6-RA | 77..1223 | 9..1155 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:17 Download gff for
FMO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec6-RA | 95..1241 | 9..1155 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:21 Download gff for
FMO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec6-RA | 95..1241 | 9..1155 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:21 Download gff for
FMO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18625343..18626314 | 9..981 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:17 Download gff for
FMO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14512848..14513819 | 9..981 | 99 | -> | Plus |
