FMO08423.5prime Sequence
1121 bp (1007 high quality bases) assembled on 2010-06-07
> FMO08423.5prime
CAGTCGACATGAGTGCATCGACGAGCACGTCGACGGCGGCGTCCCAGGAC
GCCTGCTACATATCGCTCCTTGGCCTGGCGGAGTACTTCCGCACCTCGCA
GCCGCCGAACATCAAGAAATGCATCCAGTGTCTTCAAGCCCTGTTCACAT
TTATGCCGCCCTCGAAGGTCGAGGCGCGGACACATTTGCAGATGGGCCAG
ATCCTGATGGCCTACACTAAGAACATCGATCTGGCGCGCCAGCATTTGGA
GAAGGCGTGGAGCATATCCGAACCGCTGCCCAATTTCGACGTTAAGTTCG
ACACCGCCTCGCTGCTGGCCCAACTGCATCTGCAGACGGACAGAAACTCG
CATCAGGCCAAGGCGATGCTCCGGCGGGCCGTGGAACTGTCGCAAAACAA
CGTCTATTGGCACTGCAAGCTGCTGCTCCAGCTGGCCCAAATACATGCCA
GCGATCGCGAGTACTCGCTGGCCTCCGAACTGCTGGCCGTGGGCGCGGAA
AGTGCCGACGAGGCGAGCGCCACGTACCTGAAAGTGCTCTTCCTGCTCTC
GCGCGCCATGATCCTTATGATCGAGCGCAAGACCAACGACGTGCTCGCCC
TGCTCAACTCCGCCGGCCAAATCATTGACAACAACATACCCAATCCACAC
CAGAAGGAGTACCTGAAGGTGTTTTTCCTGGTGCTACAGGTGTGCTACTA
CCTGGCCCTCGGGCAGGTAAAAACGGTGAAGCCTAGTCTCAAACAGCTGC
AGATGTCCATACAAACGATAATGGCGCCAAATTGGCCTTCGGATGAGGCG
ATTTTCGGGGCAAATCAACTCGAGATGTTTGTGTGGCTGCCCAAGGAGCA
GCTGTACGTCCTGGTCTATCTGGTCACTGTCTCCCACTCAATGATGGCGG
GCTACATGGACAAATCACAATAGTACACGGAAAAAGCACTCACCTAGATC
GAAAACTTAAGCAACAGGAGGACTACCCAATTCTATCCGTATCCAAGTGA
TCCTGCTGTAGCCACATTGTGATTGTGCCGCATGGTGATGGGCAACGGGA
CTGGCTATCCGGGAAATAGCAGCCGCAGAGACGTTGCATGGCGCCTCGCA
ACCATCTTGCTACGCGAACCC
FMO08423.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4203-RA | 2086 | CG4203-RA | 93..1208 | 5..1114 | 5130 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15209296..15210369 | 5..1076 | 4950 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:47 has no hits.
FMO08423.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:41 Download gff for
FMO08423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4203-RA | 88..1193 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:31 Download gff for
FMO08423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4203-RA | 90..1195 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:30 Download gff for
FMO08423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4203-RA | 90..1195 | 1..1102 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:30 Download gff for
FMO08423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15209293..15210398 | 1..1102 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:31 Download gff for
FMO08423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11035015..11036120 | 1..1102 | 97 | | Plus |
