FMO08424.5prime Sequence
1157 bp (1053 high quality bases) assembled on 2010-06-07
> FMO08424.5prime
CAGTCGACATGGAAACGCCTGCATATGCCACGAAATCTGGCGGAGAACTG
GTGCTGCCCGAAGCTCTGGAGGACTTGATGGATTTGGAAGACCAGGACGC
GGGCGGGATGAAGTCCAACGTTAAGGATAAATCCATGGATTTGGATATCT
ATCACGATTTGTACGATATAGAGCCTGCAGGTTCAAAGAAGCCTGACCAA
ATGGACAGATCCCTTGAACTGGACATCTACGATGATTTGGACGACTTTCA
GAAGGCCGAAGATCGTAATACCAAGGAGCTACAGGCATGGGAAGCCAAAT
ACGAAAAGGCACTGGCCGAAATTGAAGCGCTAAAGGTTGAGAATAAGGCA
CTTGGCAAGAAGATAAAAACCATGGAGGTTAATCTACAGAATCTACTGGA
CACAGCTAAGGCGGAGGTAAAGAGAAAAGAGACACTGATTGCCGAGCTGC
GAAACGAAAAGGACGATGTATGCTTCCGACGAAAACGAGCACGGGCGTTT
GACGTACCAGGTGCAAGGGAACCCGAAAGTAAGCGTCCGAAAGAATTTCA
ATCTACACCAATCGATGTCAGGAAATATCCGGAAACGAATAGAAATCCGT
TCAAAACGGCTGCAAAGGACGCCGCTAAGGATGATGCTAGGAAGATGATG
ACCAAAAAAGATGACACAACGAAAGTCGTATCAAAAGATGTTGAAAGAGG
CGTAAAATCCAAGGAGGATAATAAGATGGCGACCAATAAAGATGATGACA
AGAAGTCATCCTCAAAGGATGATGCTTGGAAATCTAGGACAAGAGAAGAC
GCCAAGAAATCGGTCCAAAGAAGCAAGTCTCCCAGGCCGGAACACTCAAA
GACCACCGATCGGAAATCTACTGCACAGGCTCGTCGTCCAGATCCACATC
GCAGCCGGAGTCCAAAACATAATTCCCGGCGAGATCATCACAGGAATCAA
GAAAGCAGTTCCCGGCACGCCAAACGGCGAAGCCAATCCGCATCGCCAGC
AGATCATTTGCCAAGAGAAAAAGCAATGCATCATCACAACTTACTGACGA
TGAAACAATGACAACGCAGCAGAGCCAGTCCCGTGAACGTTCAACTCGTA
CTGATTCCAACGACTGAAAGGTCGTACAACGAAGGGATGCTGCCTTTAAG
AAAACCA
FMO08424.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| FLASH-RB | 3486 | CG4616-RB | 278..1428 | 9..1143 | 5200 | 97.7 | Plus |
| FLASH-RA | 2830 | CG4616-RA | 273..1423 | 9..1143 | 5200 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13207651..13208190 | 458..997 | 2700 | 100 | Plus |
| 2R | 25286936 | 2R | 13207092..13207349 | 9..266 | 1290 | 100 | Plus |
| 2R | 25286936 | 2R | 13207406..13207596 | 267..457 | 955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:12 has no hits.
FMO08424.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:40 Download gff for
FMO08424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4616-RB | 267..1320 | 9..1058 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:27 Download gff for
FMO08424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FLASH-RA | 273..1326 | 9..1058 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:55 Download gff for
FMO08424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FLASH-RA | 273..1326 | 9..1058 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:55 Download gff for
FMO08424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13207092..13207349 | 9..266 | 100 | -> | Plus |
| 2R | 13207406..13207596 | 267..457 | 100 | -> | Plus |
| 2R | 13207651..13208193 | 458..999 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:27 Download gff for
FMO08424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9094597..9094854 | 9..266 | 100 | -> | Plus |
| arm_2R | 9094911..9095101 | 267..457 | 100 | -> | Plus |
| arm_2R | 9095156..9095698 | 458..999 | 99 | -> | Plus |
