FMO08426.5prime Sequence
878 bp (806 high quality bases) assembled on 2010-06-07
> FMO08426.5prime
CAGTCGACATGGAATTAGGCAAGAAACTACGAGAAGTCGGGTGGTACCTG
ACAGAGGAGGGCCTTAAAATCGTGACAACAGCCGTCGGCAGCGAGGATGT
CCGGAAAATAGTCAATGATGCACTGAATCGAGATCTGCGCGATATTGGCG
GTGGCGCACTGCCCGCGAAACGCGAAGATGCCACTTTGCCCGGTAAAATT
GTGCTGCAGGTTCAGCGTGTGCGAAATATTGCCGCTCCCAAGGCGAATGA
GGAATCGAAGGCGGCGCCACGCCTCCTTCAGTTGGATCTGAGTGATGGGC
AGAATTCCATAAAGGCCTTGGAGCTGGAGCCAGTTCCCCAACTGAATCTC
AATGTGGCTCCCGGAAGCAAGATCTATTTCAAGGCCGAGAAACTGCAGCT
TATGCAGGGATTCCTGCTGCTAAAGTCCAGTGAAATTCAGCTGCTCGGCG
GCCGTGTGGATGCACTCTACGAGAAATGGGATCTGGCCAGGACCATGATG
AGATATGCGCGCAGTGGGCGCCCCTTGAATGGGACATCAGCGCCACCCCC
GTGGGTGGCATTTGGCCGAAAAATCGATAGCAACGCCGAAAGCGAAATGA
ACTTTAAGAGCCTGGGCGAGGGCGACAAGGACAAGCCGGCAAAGGAGAAC
GAAGAGTTCAATGCCATGCGCACAGAGGCCATTGCCGTGTCCACCAAGGC
CGGCGGCAAAAAGATCTTTGGCGGCGGTGGCCAGAACATTATCGATCACA
ATGTAAGAATATCCTAGACAAGGGCTTCATCGAGGAGGAGGCCCGCAGTG
CCTTATCTGCTACCCGAACACTTGGGAGCGCGCCCTATACAATCTAAAAA
GACGCATTGAAGCTGGCGTGTGGGTCCG
FMO08426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tdrd3-RA | 2644 | CG13472-RA | 57..929 | 9..878 | 4170 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14787093..14787845 | 129..878 | 3495 | 98.5 | Plus |
| 3L | 28110227 | 3L | 14786933..14787018 | 43..128 | 430 | 100 | Plus |
| 3L | 28110227 | 3L | 14786847..14786884 | 9..46 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:58 has no hits.
FMO08426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:14 Download gff for
FMO08426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13472-RA | 55..927 | 9..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:43 Download gff for
FMO08426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13472-RA | 57..929 | 9..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:46 Download gff for
FMO08426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tdrd3-RA | 57..929 | 9..878 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:46 Download gff for
FMO08426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14786934..14787018 | 44..128 | 100 | -> | Plus |
| 3L | 14786847..14786881 | 9..43 | 100 | -> | Plus |
| 3L | 14787093..14787845 | 129..878 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:43 Download gff for
FMO08426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14780034..14780118 | 44..128 | 100 | -> | Plus |
| arm_3L | 14779947..14779981 | 9..43 | 100 | -> | Plus |
| arm_3L | 14780193..14780945 | 129..878 | 98 | | Plus |
