FMO08429.5prime Sequence
1160 bp (1052 high quality bases) assembled on 2010-06-07
> FMO08429.5prime
CAGTCGACATGTGCAATTTGTTTTGGCTTTCGGCCTGTTTTTTGGCCCTC
TGTCTGCCCCATGCCCTCAGCGAATCCAATGCCACAAGTGTTGAGGGGAC
GCCTAAGACTGAGTCAAAAGCAGAGCTGGTGCCCACGGCGGAGAAACTAA
TCCGATATCGCCGTCAGCCTCCCTACGCCGTGATCAAGCGCTCCAAGCTG
CGCCGGCGGACTAAGGGTCATCCGAAGATTAAGTACGGACCACCACCGCC
CCACATTCGCTACTCGAAACCATCATTCCCTGCCCATACCCATATCGAGG
AGCCAAGCTTCTCCCTCGATGACTTTCAGCACCTGAAGTTCGATGGTGCG
GACTTTAAGATACCCACTTCCAGTTACGAAGCGCAGTCCATGGATCTGGA
CTTCTACAATCACGATACGGAACCGGATCTCTATGGAGCACACAAATTCC
CTAGCCTGGACTTTGGCTTAGTCACCACACATGAGCATGTTCCTCACCAA
CAGTACGGGTTGCCTCCTGTGCAGCAGAGCTTCCAGCCAGATCACTCTTT
TACTACGCACTATGAGCCACCTCCAGCTCCGGCTCATCCGCCGGCTACCC
GCTATGGAGTACCCGACGCTCCTGCTCCAGTGCCCAGCTATCCACATCAG
GATCTGCCAGCTCCTGACTCCTATTCCATATATGAGCAGAAGATTCCCAA
TGTGGGCTACCATCAGAACTTTGCGGAACCACCCAAGCATCCCCCCAAAC
ATGGTTCCATCAATAATCCTAACTTTGAGATCGCCTATTCTCCGCCCGCA
TTCGAGATCAGCACTTCCTATCAGTCCAATCACCAGCAGAGCTACGTTCC
ACCCCATCCCCCATCATCTCATGATGGGGTCGCGGAGCCACCGTCTAATA
ATTATGTGAAGCCTCCTCCCCAGCACCCTCCAACTATAGTTACGCACACC
CAACATCCTTCTTCGAGCTATGACCAGTCACGCAGCATCCATCATCGAGT
TATGACCAGCCGCCACAGCATCTTCCTCCTAGCTATAGTCAGCCTCCCAA
CACCTCTTCTAGTTGACACTGCTCAACATCCCTCATCAGTAGATCACCTC
TAACATCCGTCTTTCAGTTACGAACACCTCCAGACATCCTCCTCAGGTAT
CAAATACCTC
FMO08429.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15005-RA | 2648 | CG15005-RA | 223..1364 | 9..1131 | 5190 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4202207..4203217 | 1048..42 | 4815 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:50 has no hits.
FMO08429.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:07 Download gff for
FMO08429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15005-RA | 214..1378 | 1..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:06 Download gff for
FMO08429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15005-RA | 215..1379 | 1..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:19 Download gff for
FMO08429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15005-RA | 215..1379 | 1..1144 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:19 Download gff for
FMO08429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4202104..4203217 | 42..1135 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:06 Download gff for
FMO08429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4202104..4203217 | 42..1135 | 97 | <- | Minus |
