FMO08435.5prime Sequence
1122 bp (1024 high quality bases) assembled on 2010-06-07
> FMO08435.5prime
CAGTCGACATGGGTCTACTGAGCGAGGGCAGTCCACTCTCCTGGGAGGAG
ACCAAGGCGCTGGCTGATCATGTGCGTGAGCATGGCGTCAATCAGTTCAT
CAACTTGTACCACAGACTCAAGGATCGCCAGGGTGACATATTGAAATGGG
GCGACGAGGTGGAGTACATTATTGTCAAGTTCGACGATGAACAGAAGGTG
GCACGTGTGGCGCTGCGCGCCCAGGATCTGCTGGCACAGCTCAATGAGAA
GGAACTGGCCGATCCCAATGGTGTCAAGTCGCTGTGGCGTCCGGAATACG
GAGCCTACATGATTGAGGGCACACCGGGCAAACCCTTTGGCGGTCTGATG
GCACACTTCAATCTGGTTGAGGCCAATATGCGCTATCGTCGCGAAGAGGT
CACCGAGCTGCTGGCCAAGGACGAGTGCGTTATGTCCATTACGAATTTCC
CACGACTCGGCGCACCAAATTTCACTTATCCGCTTGCCCAGCCGCGTCCC
GAGGATCCTCTCAGTTCAGCCCGCTCGCTCTACTTCCCGGATGAGGCCAT
CTTTCCGGGTCACCCGCGTTTCAAGACACTCACGCGTAACATTCGCAAGC
GACGCGGCGAGAAGGTGTCCATCAAGCTAAAAGTTTTCAAGGACACAAAG
ACGAAGCTACCGGTGGAGGGTGCTCCGCCTGGCGAACCGGATGTGGTGCT
CCTGGACGCCATGGGCTTCGGCATGGGCTGCTGTTGCTTGCAGCTCACCT
TCCAGGCCTGTAACATTACGGAGGCGCGTCGCCTCTACGATCAGCTGGCT
CCCCTCTGTCCGATCATGTTGGCTCTGACGGCCGCTTCGCCCATTTACAG
GGGCTATCTAACCGAATCAGATTGTCGATGGAATGTGATTAGCTCCTCGG
TGGATTGCCGCACGGAAGAGGAACGCGGACTGGCGCCGCTGGATCAGCAA
GTTCAGATAGCCAAGTCGCGATACGATTCGATTGACTCGTTATTTGTCGC
CGAGGGAGCAAATATACGATGTACCGCTCACATACGATGAGAAGTTCTAT
CAGCGTCTGGTGGAGGGGTATCGATCATCTTGTTTGACCCAGCATGTTGC
CAATTGTTATACGCGACACGTG
FMO08435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-RD | 3231 | CG2259-RD | 128..1245 | 9..1119 | 5240 | 98.5 | Plus |
| Gclc-RC | 4238 | CG2259-RC | 734..1851 | 9..1119 | 5240 | 98.5 | Plus |
| Gclc-RB | 3145 | CG2259-RB | 42..1159 | 9..1119 | 5240 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8105268..8105892 | 633..9 | 3125 | 100 | Minus |
| X | 23542271 | X | 8104717..8105195 | 1105..632 | 1890 | 96.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:07 has no hits.
FMO08435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:20 Download gff for
FMO08435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 33..1163 | 1..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:47 Download gff for
FMO08435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 33..1163 | 1..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:49 Download gff for
FMO08435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 33..1163 | 1..1122 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:49 Download gff for
FMO08435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8104697..8105193 | 634..1122 | 96 | <- | Minus |
| X | 8105268..8105897 | 1..633 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:47 Download gff for
FMO08435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7998730..7999226 | 634..1122 | 96 | <- | Minus |
| arm_X | 7999301..7999930 | 1..633 | 99 | | Minus |
