FMO08436.5prime Sequence
1165 bp (1042 high quality bases) assembled on 2010-06-07
> FMO08436.5prime
CAGTCGACATGTCTACCTTTGGCGCTGAAGTGGATCAGGTTTGGCCAGCG
GTCACCGGTGATTCCCCGCATCTCACTAATTTCGGACGCAAATTGCTGAA
GGATTGCCGCCAAGTGCAGAAACCAATCGGAGGATACGAAAATTTGGGCA
ATGTGATTAAATTGTCCGCGGAGTTTCCGCTGGAGTTCGGCGTGAACAGT
GTCAAAGTATACCGGCAATCTCCATCGCGGCTTGCCCGGATAAATGAGGA
AGTGGCATCCGCCTATCCATTGATACACGAACGTACATTGGGCCTCTACT
TGCAGTACTTGGAGCACAAGTGTCGTTGGGGCAACGCGGTGGAAAAGCCC
ATCTACCGGAATTTATCGCTATGCGGATTTGTGCAACGTCTGCTGGTAAA
GCGTTGCGCCAGCTTCTTTGCGCGGAACGACAAGTACCTGCTGGTGAGCG
GAGAGTCCGGGGCCAGTGGCTTCGAAGCCGTGGGTACTCGGGAGGAGAAG
GCGCCTCTGGTGCTGGCCAACGTGCTCAGCTATGACGATATCAAGCTCTC
CGCCCTGCTTTCCGTGAGCTCCCGCACGGAGTTTGTCAATGAGGGCGAAC
GAACCAATTGCGGTCACGTTGATCTGAACACGAAAACTTTGGAACGTCAC
GGGGTTATTGTGGGCATGATTGGAGCCCGTCTGTCGCGACGTAATCTAAT
GGAGTTCCAGGACATTGTAATCGCACGTCAGCAGAATACGCGTGAAAGGG
GCTACGGAATGGCATTGGATGAGCCGGCTACCACGCGTGATGAGGACTAT
CGACGACTGTGGCGCGAGTTCTATGCCACACGGGATCTCATCCACGGCCA
GGCAGTCATTGACAATCAGCGTTTCGGACCATCGAAAACAAGATGGACGT
GTTCGACATCTGGTGATGAAGCGGCGTTACGCCATCAGCTTCGACATGCT
GCTGCTGGAGCAGAGGCAAGGGCAAAACGGGGTGAAAAAGCTGGCGTACA
TCATGGTGGTGGGCTTCGGCTTGGGGCGTGTGGAGCAGCAGAACAGCAGG
AGCGCATCTTCATGAAGACTCAGCAGCGTATGCGCACGCCTGGGCAACAG
CTCAATACGGTGGCCTCGTGCAACTTCCCTGATCGATCACCATTGGCGCG
GCTTAGCACGGAATC
FMO08436.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2909-RA | 2018 | CG2909-RA | 154..1275 | 8..1122 | 5215 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10327065..10327864 | 330..1122 | 3335 | 97.3 | Plus |
| X | 23542271 | X | 10326617..10326794 | 8..185 | 890 | 100 | Plus |
| X | 23542271 | X | 10326857..10327004 | 184..331 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:57:07 has no hits.
FMO08436.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:35:18 Download gff for
FMO08436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2909-RA | 140..1277 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:46 Download gff for
FMO08436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2909-RA | 147..1284 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:53 Download gff for
FMO08436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2909-RA | 147..1284 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:53 Download gff for
FMO08436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10326610..10326794 | 1..185 | 97 | -> | Plus |
| X | 10326859..10327003 | 186..330 | 100 | -> | Plus |
| X | 10327066..10327873 | 331..1131 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:46 Download gff for
FMO08436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10220643..10220827 | 1..185 | 97 | -> | Plus |
| arm_X | 10220892..10221036 | 186..330 | 100 | -> | Plus |
| arm_X | 10221099..10221906 | 331..1131 | 97 | | Plus |
