FMO08467.5prime Sequence
1152 bp (1062 high quality bases) assembled on 2010-06-07
> FMO08467.5prime
CAGTCGACATGATTGGTGTGCTAATGCGTTTTCTCTGGTCCTTGGCCATG
GTGCAGTGCATCCAGGCTAGAGTGTCGATGCTGCCTCGTTTTTATGGACA
AGACAGCGCTGTTATAGTGGACATCAATAGAAAATTCCCACCTAGAATGG
ACTCCAAGCTGCAGAATGCCCTGTACTACAACCTGCCGGTCTACAAACTG
ATAAAGCCAACCACAACAACTACGACAACCACGACGGCTGCTCCAACCTC
TGGCTATCCTGCTGATCTCCTGAACATTGCTCACAACAAGCTGGGCCTCA
AAGATCTGCCCAATCTCGAGGAGCTGGGCGAGATGATTGGTACGGATGGT
GCCAGCGAGACCATAGACTATATACGCACGCTAACTGGAACGGAGGAGGG
TTTGGCCCTGATGAAACAGTATCTGGATGCCCTGCACTTCGAGGAGGCGG
AGGAGGAGAATGTGGCCGAGGAACAAGAGAAGGCTGAAGACGACGACGAC
GATGATGATGACAACACCATGGGCAATGCCAGCTACGATGAGATGCCGCA
GGAAAAATCCACCACCACTGCAGATCCCCGTCCTGAGCTGAGTTTAATGC
AGCGTTTCGGTGACTTTGTGAAGCAGTACAACCTGTGGTCTGGTCAGGTC
ACCACTACCACCACTCCTGCTCCGTTCATCGCTCGGCCAAGTGGCTCTTT
CCAGCCCGTCTTTGTGGCTCCTCCTCCTGCTGGCTTGAAACCTTTTCGTC
CCATCCTGGTTAGGCAGCCACTGCCGTATCACTATCCCATTCCCCTGCGT
CCCGTATCGCTGGCCACCACAAAGCCAATCCAGGTGACCACCACCACCAC
GACCACAACCACACCTGCCCCCGTGACCAAGCCACATCTCAACACGCCCA
AGCTGATCATGCAAGAGGATGCGGAGGGCAAATACTCAACATTGCCTCCG
TACATCCAGCAGTTGGCCAAATGGCCATATTTTCGCCGCAAGTCGTGAAT
CTTTCTGGAGCGCAGCCCAGTTGGCGAACTGGCCAGCGCCTGAGCACCTG
CCCTCAGTCCGAACAGACCAGGCATGAAACCCAGGTGCTCAAGCTGCCAC
CCGCACTGAAGCAACACGAATGATCTTTCAGCGCTATCGAGGCTCAAGGA
CT
FMO08467.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| link-RA | 1394 | CG13333-RA | 40..1190 | 9..1143 | 5120 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13555988..13556994 | 9..1012 | 4875 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 20:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 861..905 | 468..512 | 116 | 78.3 | Plus |
FMO08467.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:55 Download gff for
FMO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13333-RA | 92..1196 | 5..1098 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:14 Download gff for
FMO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| link-RA | 36..1140 | 5..1098 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:54 Download gff for
FMO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| link-RA | 36..1140 | 5..1098 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:54 Download gff for
FMO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13555984..13557088 | 5..1098 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:14 Download gff for
FMO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9443489..9444593 | 5..1098 | 98 | | Plus |
