FMO08472.5prime Sequence
1132 bp (1005 high quality bases) assembled on 2010-06-07
> FMO08472.5prime
CAGTCGACATGTCTAGCCCACATATCAACTACCGCTCCCTGGCCGAGGAG
GCGGCCAGTCCGTTCCTGGAGCACCATCCCTCCACAGGCCAAGGCCCATC
CAAAACACAAGACGCAAAAGCGAACGCAGCTGCTGCGCATTTAGACCCCC
TCGGTGAACACGGGCTGGAGCAGCCGCTGGATGAGCACGACACCGAGCAT
GAGGGCGAGGACACGCCTCGAAACAGTGGCGTCATGATCCACATGGTTCC
GGAGACGGGGCGTGCGCGGTGGAACCACATCGAGGACCTTGACTCGTTCT
TCTCGCGAATGTATCAGTACCAGCAGAAGCACGGATTCACAGTGATTGTA
GTGGACGAAATGCTACAGGTTCTGGAGTTTGGTTTCGTCGTCTGGCTACT
TGCCTTTGTGATGCACTGCGTCCGATTTGACGTGCTCTTTGGGGACACCC
CTCCAGGGGGACTTAACCCCAACAAGACAACTTTATCCGATGTGATGTAC
CCCACAGGCGAGTGCTTAGCCAACTTCACTTGGGTCACGTACCTGGTTGT
GTTCATAGCCGCTATCTATTTGGGCATAAGGCTTCTGAAAATGGTGTACC
ATATTACCCAGTACGCCGATATAAAGAGATTCTACAACTCTGCGCTTCAT
ATCGAGGATTCGGATCTGGACAACTTTACGTGGCACGAGGTGCAACAGCG
GATTCGTCGCGTCCAGGCCGAACAGCATATGTGCATCGACAAGGAGTCGC
TTACGGAATTGGACATCTATCACCGAGTTCTGCGCTTCAAGAACTACCTA
GTGGCACTGATGAACAAGCAACTGCTGCCTGTAAAGTTCCACATACCGCT
GTATGGCGAAGTGGTCTCGCTGAGTAGAGGTATGTTGTTCAACATTGACT
TCATTCTTGTTTCGCGGCCCTGGATCTCCCTTCCAGACAATTGGCAGCTG
CGTGATGAGTTTGCCGTAAGAAGCAATCAACGAGCTGCGCACGACTCTCA
ACTGAATATTGGGGGTGCGTGTAATTTGGTCTAGCGCTGTGATCTCCGTT
GCAACTATCTACTCAGTTTCTCCTTGCACATTCTTCGTAGGACTGGTTCC
TTGCCTGCTTACATGTCCATTACGCGCCTCTA
FMO08472.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg9-RB | 2833 | CG3615-RB | 122..1272 | 9..1132 | 4965 | 96.9 | Plus |
| Atg9-RA | 2833 | CG3615-RA | 122..1272 | 9..1132 | 4965 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16294521..16295492 | 9..980 | 4735 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:15 has no hits.
FMO08472.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:34:07 Download gff for
FMO08472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg9-RA | 118..1236 | 5..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:30 Download gff for
FMO08472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg9-RA | 120..1238 | 5..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:22 Download gff for
FMO08472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg9-RA | 120..1238 | 5..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:22 Download gff for
FMO08472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16294519..16295637 | 5..1103 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:30 Download gff for
FMO08472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12182024..12183142 | 5..1103 | 97 | | Plus |
