Clone FMO08473 Report

Search the DGRC for FMO08473

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:84
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14269-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08473.5prime Sequence

596 bp (-86 high quality bases) assembled on 2010-06-07

> FMO08473.5prime
CAGTCGACATGCTGGTCATGGACGCATTGTTTAACAGCCTATTGGTGGTC
AGTTCCGGCTATGCGATCTACACTCTCCATCCAATGGAAACACCCTATGG
CTATGCAACAGCGGCCTTGAGCCTGGTCCATGGAATTTTGGGAATGGTGC
GAGCGGCGAGCAACGACAATGACGAATGCAATCGGGTGCGATTGATTACG
TCGGGCATCATGGAAATAGTACCGCTGCCCCTGACCAATATGGAGCTCTA
TCTGAAGTCCACCAATCCGGGCTTGGCTTTGGCGCACACATGTTTTGTGG
TGCCATTAGTCTACGATATGTTGGCCAAAGTGGTTGACACCGAGGATACC
GTAACGGAGACCCTTAAGGAACTAACACTGTTGGGCAACGTTGTGTCCAT
GCTCTTTTTGGGCGTCAACGAATCAAATAATATGTACGGTTTCTTGGCTG
CCATCGCTTTTGGAGCTCGATACGGTTCCGCTTTTCTCAACTACTACTGG
AAGGGATTAAGTGCCGAATTCACCCTACTGGCCCACTCCATGTTTGTCCT
ACTGATGACGATGACCCTTTCGGCGAAAGCAAGCTTTCTAGACCAT

FMO08473.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14269-RB 815 CG14269-RB 98..667 9..578 2700 98.2 Plus
CG14269-RA 835 CG14269-RA 148..717 9..578 2700 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3435091..3435660 578..9 2700 98.2 Minus
Blast to na_te.dros performed on 2014-11-28 19:01:41 has no hits.

FMO08473.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:44 Download gff for FMO08473.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14269-RA 108..680 9..581 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:22 Download gff for FMO08473.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14269-RA 148..722 9..583 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:12 Download gff for FMO08473.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14269-RA 148..722 9..583 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:12 Download gff for FMO08473.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3435086..3435660 9..583 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:22 Download gff for FMO08473.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3329119..3329693 9..583 97   Minus