FMO08476.5prime Sequence
614 bp (614 high quality bases) assembled on 2010-06-07
> FMO08476.5prime
CAGTCGACATGTCTGCAGCCAACATGCCGACGACAACAGGAGCTCAGGGA
TCGGGAAACCAAGTTCCCACAACTAGCACTACGATTGTAAACCACTTCCG
GGAGTTGATCAAGGAACCGAAGAACCTCGACGAGGCGGCCAACTATCTGT
ACCAGTCGCTGCTCGACGACGCCGTAGTCGGAATCTTTAACGAGACACAT
CATCTGCGAAAGTCAGGGAATCTGGCCGCCCTGGACGGAGTGCCGGAGGA
CTCAACCTATCGAATGTGCGAGATGCCCAACCTGGACATATTCGGCATCT
CAACGGCCAAAAAGCCAATGGACTGCACCTGCCCCAACTGTGATCGCCTG
GTGGCCGCCGCCCGCTTCGCCCCGCACCTGGAAAAGTGCATGGGCATGGG
TCGTATCTCGTCGCGAATTGCCTCTCGTCGCTTGGCCACCAAAGAGGGCG
CCACATCCGCCCACCTGCACTCTTCGGGAAATACCGGAGGCACTGATGAT
GAGGATGACGTGGACTGGTCGTCCGACAAGCGTCGAAAGAAATCAAACCA
GAACTCAAGGAACAACGGCTCCAAGAAGAACAATGGCAAAACCTTTGCAA
GCTTTCTAGACCAT
FMO08476.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf11-RB | 800 | CG13379-RB | 149..736 | 9..596 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18681101..18681688 | 596..9 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:19 has no hits.
FMO08476.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:37 Download gff for
FMO08476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 103..690 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:12 Download gff for
FMO08476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 149..736 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:51 Download gff for
FMO08476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 149..736 | 9..596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:51 Download gff for
FMO08476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18681101..18681688 | 9..596 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:12 Download gff for
FMO08476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18674201..18674788 | 9..596 | 100 | | Minus |