Clone FMO08477 Report

Search the DGRC for FMO08477

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:84
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14315-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08477.5prime Sequence

677 bp (677 high quality bases) assembled on 2010-06-07

> FMO08477.5prime
CAGTCGACATGAGGGTCTACTTGTATCAAATGCGCCCGGTGCTCTTTCTC
TTCTACATGGTGGAGACGACGGCCAACTTATTCGTTTTGTACTACCAACT
GAAAGCATTTGTTTTCGTCAATCTGACAACGATGAAATGGGAAGATGTTC
TAATCCAAAGCTTTTATATGTCCTTCTTTTACATATTCACAGTGGTAACG
CTCTTTGCCAGCATAAATCTCTGCACCGGTCATCGCACATCGATCGTTGA
GGAAGTTGTGCGTCCTCTGATCGGATTTGTTCTATATACGGTAATATCGT
TGATGGCACTGGGCGATGCCGAGACGGATTTCTATATATGGTATGATGGA
AGGAACCCGGATGATTTACTATATCCGGAGAAGCCGCTCCATCCGTTCTT
CGGTAGCCTGCGGGACCAGGCGACAGCCTCATTGGTGTCCAGTGTTATCT
ATCTGCTGCACTGCCTCATTGCGTTGGATGTCCTTCTGTCGAATGACGAT
TCGGATAACGAACGCGAGTCATCCAATTCCTCCGACGATGTGAACGAAGA
GGTCGACTACGTTCCAGTGCGTCTGTACGTCTTTGGCGGCGTGATGCAAC
GCTGGCTGGAGCAGTTCGACTGGTTTCAGGACTTTACCCACAGTGGAGTC
ACAGATATCGCAAGCTTTCTAGACCAT

FMO08477.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14315-RA 771 CG14315-RA 70..720 9..659 3255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18158770..18159420 9..659 3255 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:01:53 has no hits.

FMO08477.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:35 Download gff for FMO08477.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14315-RA 1..654 9..662 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:30 Download gff for FMO08477.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14315-RA 62..720 1..659 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:21 Download gff for FMO08477.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14315-RA 62..720 1..659 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:21 Download gff for FMO08477.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18158762..18159420 1..659 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:30 Download gff for FMO08477.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13984484..13985142 1..659 99   Plus