FMO08485.5prime Sequence
534 bp (509 high quality bases) assembled on 2010-06-07
> FMO08485.5prime
CAGTCGACATGGAAAAGAATCTACCGGCATCCATTTCGAAGAACAAGAGA
TTCGAATCGACGATGATGAGTTCTCCCGTGCCAAGTTTTGCCAAGTCCAA
TGGGATGAAAAAGAAGACTACGACCTTTTCACGATTCATCCGCACCGATC
GTGCCGCAGGGGGCTTGACCAATGGGGTGAAAAAGAAGACTGTATCCGTT
TCGCGATTCAGCCGCGTCCATCGTGTCGCAGAGGACCTGACCCGTGAATT
GGCCGGCATGTCGTTGAAAAAACAGGCTGTGCAACCGCGTCGTCGTTATT
CTTTCACCAATGAGTTCCCGGATGATCCACCAAAGCCAGCTCCCAACCGT
CGCTGCTCGCTTGTCCGCCGCAACTCAATTAACCTCCCAATTGAGTCCAA
TTTTGATATGTCCGTGCTGATGGATGATGATGATGAGGAGGAGGAGGATG
ATGAGATGATGATGGCGTAGGAGGAGGATGATGACATGATGATGGCGAAG
GAGGAGGACGATGAAGCTTTGATTAAAATATGAA
FMO08485.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14810-RA | 720 | CG14810-RA | 64..571 | 9..516 | 2495 | 99.4 | Plus |
| CG14810-RB | 717 | CG14810-RB | 64..568 | 9..516 | 2440 | 98.8 | Plus |
| CG14811-RB | 849 | CG14811-RB | 117..389 | 9..281 | 660 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1819644..1820122 | 516..38 | 2350 | 99.4 | Minus |
| X | 23542271 | X | 1821944..1822174 | 269..39 | 615 | 84.4 | Minus |
| X | 23542271 | X | 1821606..1821768 | 442..280 | 530 | 88.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:41 has no hits.
FMO08485.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:07 Download gff for
FMO08485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14810-RA | 56..571 | 2..516 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:02 Download gff for
FMO08485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14810-RA | 56..571 | 2..516 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:08 Download gff for
FMO08485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14810-RA | 56..571 | 2..516 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:08 Download gff for
FMO08485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1819644..1820121 | 39..516 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:02 Download gff for
FMO08485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1713677..1714154 | 39..516 | 99 | <- | Minus |
